Commit 0b04ce31 authored by TomKellyGenetics's avatar TomKellyGenetics
Browse files

correct test config for GitHub Actions:

parent d3036d67
Loading
Loading
Loading
Loading
+2 −15
Original line number Diff line number Diff line
@@ -16,17 +16,6 @@ jobs:
          image: docker:latest
          run: echo "hello world"

  test-cellranger:
    runs-on: ubuntu-latest
    steps:  
      - uses: actions/checkout@v2
      - name: What OS is running
        run: uname -a
      - name: Where am i
        run: pwd; ls
      - name: call Cell Ranger
        run: which cellranger; cellranger -v

  test-cellranger:
    runs-on: ubuntu-20.04
    steps:
@@ -51,7 +40,7 @@ jobs:
    - name: Cell Ranger Call
      run: docker run ${{ secrets.DOCKER_HUB_USERNAME }}/cellranger_clean:latest cellranger -v

  test-universc:
  test-repo:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v2
@@ -62,9 +51,7 @@ jobs:
      - name: pull updates
        run: cd universc; git pull origin master
      - name: call UniverSC
        run: bash /universc/launch_universc.sh -v
      - name: test callas
        run: bash /universc/test/test_call.sh
        run: ls /universc/launch_universc.sh 

  test-universc:
    runs-on: ubuntu-20.04