Loading launch_universc.sh +4 −4 Original line number Diff line number Diff line Loading @@ -827,7 +827,7 @@ for fq in "${read1[@]}"; do if [[ $fq == *'.gz' ]]; then gunzip -c $fq > $to else cp $fq $to cp -T $fq $to fi elif [[ $convert == "keep" ]] && [[ ! -f $to ]]; then echo " handling $fq ..." Loading @@ -835,7 +835,7 @@ for fq in "${read1[@]}"; do if [[ $fq == *'.gz' ]]; then gunzip -c $fq > $to else cp $fq $to cp -T $fq $to fi fi done Loading @@ -852,14 +852,14 @@ for fq in "${read2[@]}"; do if [[ $fq == *'.gz' ]]; then gunzip -c $fq > $to else cp $fq $to cp -T $fq $to fi elif [[ $convert == "keep" ]] && [[ ! -f $to ]]; then echo " handling $fq ..." if [[ $fq == *'.gz' ]]; then gunzip -c $fq > $to else cp $fq $to cp -T $fq $to fi fi done Loading Loading
launch_universc.sh +4 −4 Original line number Diff line number Diff line Loading @@ -827,7 +827,7 @@ for fq in "${read1[@]}"; do if [[ $fq == *'.gz' ]]; then gunzip -c $fq > $to else cp $fq $to cp -T $fq $to fi elif [[ $convert == "keep" ]] && [[ ! -f $to ]]; then echo " handling $fq ..." Loading @@ -835,7 +835,7 @@ for fq in "${read1[@]}"; do if [[ $fq == *'.gz' ]]; then gunzip -c $fq > $to else cp $fq $to cp -T $fq $to fi fi done Loading @@ -852,14 +852,14 @@ for fq in "${read2[@]}"; do if [[ $fq == *'.gz' ]]; then gunzip -c $fq > $to else cp $fq $to cp -T $fq $to fi elif [[ $convert == "keep" ]] && [[ ! -f $to ]]; then echo " handling $fq ..." if [[ $fq == *'.gz' ]]; then gunzip -c $fq > $to else cp $fq $to cp -T $fq $to fi fi done Loading
