Loading launch_universc.sh +11 −5 Original line number Diff line number Diff line Loading @@ -440,7 +440,7 @@ if [[ -f ${DIR}-cs/${VERSION}/lib/python/cellranger/barcodes/.last_called ]] fi bash $(basename "$0") -t $technology --setup setup=false if [ ! convert ] if [ ! $convert ] then echo " warning: technology changed to $technology since last run" convert=true Loading Loading @@ -608,8 +608,11 @@ esac #check if file in directory and link if not path=$read read=`echo $read | sed -r "s/.+\/(.+)/\1/"` if [[ $verbose == "true" ]] then echo "read: $read" echo "path: $path" fi if [ ! -f $read ] || [ -h $read ] then echo " warning: file $read not in current directory" Loading Loading @@ -661,8 +664,11 @@ esac #check if file in directory and link if not path=$read read=`echo $read | sed -r "s/.+\/(.+)/\1/"` if [[ $verbose == "true" ]] then echo "read: $read" echo "path: $path" fi if [ ! -f $read ] || [ -h $read ] then echo " warning: file $read not in current directory" Loading Loading
launch_universc.sh +11 −5 Original line number Diff line number Diff line Loading @@ -440,7 +440,7 @@ if [[ -f ${DIR}-cs/${VERSION}/lib/python/cellranger/barcodes/.last_called ]] fi bash $(basename "$0") -t $technology --setup setup=false if [ ! convert ] if [ ! $convert ] then echo " warning: technology changed to $technology since last run" convert=true Loading Loading @@ -608,8 +608,11 @@ esac #check if file in directory and link if not path=$read read=`echo $read | sed -r "s/.+\/(.+)/\1/"` if [[ $verbose == "true" ]] then echo "read: $read" echo "path: $path" fi if [ ! -f $read ] || [ -h $read ] then echo " warning: file $read not in current directory" Loading Loading @@ -661,8 +664,11 @@ esac #check if file in directory and link if not path=$read read=`echo $read | sed -r "s/.+\/(.+)/\1/"` if [[ $verbose == "true" ]] then echo "read: $read" echo "path: $path" fi if [ ! -f $read ] || [ -h $read ] then echo " warning: file $read not in current directory" Loading
