Commit 05559f7f authored by smorabit's avatar smorabit
Browse files

fix kME issue

parent 687007cd

NEWS.md

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# scWGCNA 0.1.0 (2022-02-17)

# scWGCNA 0.0.1 (2022-02-17)

## Added

- Placeholder.

docs/articles/basic_tutorial.html

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@@ -41,7 +41,7 @@ 
      </button>

      <span class="navbar-brand">

        <a class="navbar-link" href="../index.html">hdWGCNA</a>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="">0.0.0.9000</span>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="">0.0.1</span>

      </span>

    </div>
@@ -174,7 +174,7 @@ 


<span class="co"># co-expression network analysis packages:</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="http://horvath.genetics.ucla.edu/html/CoexpressionNetwork/Rpackages/WGCNA/" class="external-link">WGCNA</a></span><span class="op">)</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va">hdWGCNA</span><span class="op">)</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://smorabit.github.io/scWGCNA/">hdWGCNA</a></span><span class="op">)</span>



<span class="co"># using the cowplot theme for ggplot</span>

<span class="fu"><a href="https://ggplot2.tidyverse.org/reference/theme_get.html" class="external-link">theme_set</a></span><span class="op">(</span><span class="fu"><a href="https://wilkelab.org/cowplot/reference/theme_cowplot.html" class="external-link">theme_cowplot</a></span><span class="op">(</span><span class="op">)</span><span class="op">)</span>

docs/articles/consensus_wgcna.html

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@@ -41,7 +41,7 @@ 
      </button>

      <span class="navbar-brand">

        <a class="navbar-link" href="../index.html">hdWGCNA</a>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="">0.0.0.9000</span>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="">0.0.1</span>

      </span>

    </div>
@@ -150,7 +150,7 @@ 


<span class="co"># co-expression network analysis packages:</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="http://horvath.genetics.ucla.edu/html/CoexpressionNetwork/Rpackages/WGCNA/" class="external-link">WGCNA</a></span><span class="op">)</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va">hdWGCNA</span><span class="op">)</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://smorabit.github.io/scWGCNA/">hdWGCNA</a></span><span class="op">)</span>



<span class="co"># network analysis &amp; visualization package:</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://igraph.org" class="external-link">igraph</a></span><span class="op">)</span>

docs/articles/customization.html

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Original line number Diff line number Diff line
@@ -41,7 +41,7 @@ 
      </button>

      <span class="navbar-brand">

        <a class="navbar-link" href="../index.html">hdWGCNA</a>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="">0.0.0.9000</span>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="">0.0.1</span>

      </span>

    </div>
@@ -150,7 +150,7 @@ 


<span class="co"># co-expression network analysis packages:</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="http://horvath.genetics.ucla.edu/html/CoexpressionNetwork/Rpackages/WGCNA/" class="external-link">WGCNA</a></span><span class="op">)</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va">hdWGCNA</span><span class="op">)</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://smorabit.github.io/scWGCNA/">hdWGCNA</a></span><span class="op">)</span>



<span class="co"># using the cowplot theme for ggplot</span>

<span class="fu"><a href="https://ggplot2.tidyverse.org/reference/theme_get.html" class="external-link">theme_set</a></span><span class="op">(</span><span class="fu"><a href="https://wilkelab.org/cowplot/reference/theme_cowplot.html" class="external-link">theme_cowplot</a></span><span class="op">(</span><span class="op">)</span><span class="op">)</span>

docs/articles/enrichment_analysis.html

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@@ -41,7 +41,7 @@ 
      </button>

      <span class="navbar-brand">

        <a class="navbar-link" href="../index.html">hdWGCNA</a>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="">0.0.0.9000</span>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="">0.0.1</span>

      </span>

    </div>
@@ -150,7 +150,7 @@ 


<span class="co"># co-expression network analysis packages:</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="http://horvath.genetics.ucla.edu/html/CoexpressionNetwork/Rpackages/WGCNA/" class="external-link">WGCNA</a></span><span class="op">)</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va">hdWGCNA</span><span class="op">)</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://smorabit.github.io/scWGCNA/">hdWGCNA</a></span><span class="op">)</span>



<span class="co"># gene enrichment packages</span>

<span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va">enrichR</span><span class="op">)</span>

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