Format code. (c6d9e3ba) · Commits · github_fork / Chromap

src/mapping_metadata.h

+15 −8

Original line number	Diff line number	Diff line
		@@ -25,14 +25,6 @@ class MappingMetadata {
		repetitive_seed_length_ = 0;
		}

		inline void PrintCandidates(FILE *fp) {
		uint32_t i ;
		for (i = 0 ; i < positive_candidates_.size() ; ++i)
		fprintf(fp, "+ %d %d %d %d\n", i, (int)(positive_candidates_[i].position>>32), (int)(positive_candidates_[i].position), positive_candidates_[i].count) ;
		for (i = 0 ; i < negative_candidates_.size() ; ++i)
		fprintf(fp, "- %d %d %d %d\n", i, (int)(negative_candidates_[i].position>>32), (int)(negative_candidates_[i].position), negative_candidates_[i].count) ;
		}

		inline size_t GetNumCandidates() const {
		return positive_candidates_.size() + negative_candidates_.size();
		}
		@@ -90,6 +82,21 @@ class MappingMetadata {
		num_second_best_mappings_ = num_second_best_mappings;
		}

		// For debug only.
		inline void PrintCandidates(FILE *fp) {
		uint32_t i;
		for (i = 0; i < positive_candidates_.size(); ++i)
		fprintf(fp, "+ %d %d %d %d\n", i,
		(int)(positive_candidates_[i].position >> 32),
		(int)(positive_candidates_[i].position),
		positive_candidates_[i].count);
		for (i = 0; i < negative_candidates_.size(); ++i)
		fprintf(fp, "- %d %d %d %d\n", i,
		(int)(negative_candidates_[i].position >> 32),
		(int)(negative_candidates_[i].position),
		negative_candidates_[i].count);
		}

		protected:
		inline void ReserveSpace(int reserve_size) {
		minimizers_.reserve(reserve_size);