Commit a019286c authored by Swift Genomics's avatar Swift Genomics Committed by swiftgenomics
Browse files

Rename hit.h to minimizer_utils.h.

parent 6eb7b958

src/index.cc

+1 −1
Original line number Diff line number Diff line
@@ -5,7 +5,7 @@ 
#include <algorithm>

#include <iostream>



#include "hit.h"

#include "minimizer_utils.h"

#include "minimizer_generator.h"



namespace chromap {

src/minimizer.h

+1 −1
Original line number Diff line number Diff line
@@ -3,7 +3,7 @@ 


#include <utility>



#include "hit.h"

#include "minimizer_utils.h"

#include "strand.h"



namespace chromap {

src/hit.h→src/minimizer_utils.h

+3 −3
Original line number Diff line number Diff line 
#ifndef HIT_H_

#define HIT_H_

#ifndef MINIMIZER_UTILS_H_

#define MINIMIZER_UTILS_H_



#include "strand.h"
@@ -27,4 +27,4 @@ inline static bool AreTwoHitsOnTheSameStrand(uint64_t seed_hit1, 


}  // namespace chromap



#endif  // HIT_H_
 
#endif  // MINIMIZER_UTILS_H_

src/mmcache.hpp

+1 −1
Original line number Diff line number Diff line 
#ifndef CHROMAP_CACHE_H_

#define CHROMAP_CACHE_H_



#include "hit.h"

#include "index.h"

#include "minimizer.h"

#include "minimizer_utils.h"



#define FINGER_PRINT_SIZE 103

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