Fix an issue of not outputing the summary statistics. (937fbadd) · Commits · github_fork / Chromap

src/chromap.h

+1 −1

Original line number	Diff line number	Diff line
		@@ -1099,7 +1099,6 @@ void Chromap::MapPairedEndReads() {
		}
		mapping_writer.OutputMappings(num_reference_sequences, reference,
		mappings_on_diff_ref_seqs);
		mapping_writer.OutputSummaryMetadata();
		// Temporarily disable feature matrix output. Do not delete the following
		// commented code.
		// if (!is_bulk_data_ && !matrix_output_prefix_.empty()) {
		@@ -1120,6 +1119,7 @@ void Chromap::MapPairedEndReads() {
		// }
		//}
		}
		mapping_writer.OutputSummaryMetadata();

		reference.FinalizeLoading();