Loading README.md +2 −2 Original line number Diff line number Diff line Loading @@ -28,9 +28,9 @@ cd chromap && make ## <a name="uguide"></a>User Guide Chromap is an ultrafast method for aligning and preprocessing high throughput chromatin profiles. Typical use cases include: (1) triming sequencing adapters, chromatin profiles. Typical use cases include: (1) trimming sequencing adapters, mapping bulk ATAC-seq or ChIP-seq genomic reads to the human genome and removing duplicates; (2) triming sequencing adapters, mapping single cell ATAC-seq genomic duplicates; (2) trimming sequencing adapters, mapping single cell ATAC-seq genomic reads to the human genome, correcting barcodes, removing duplicates and performing Tn5 shift; (3) split alignment of Hi-C reads against a reference genome. In all these three cases, Chromap is 10-20 times faster while being accurate. Loading Loading
README.md +2 −2 Original line number Diff line number Diff line Loading @@ -28,9 +28,9 @@ cd chromap && make ## <a name="uguide"></a>User Guide Chromap is an ultrafast method for aligning and preprocessing high throughput chromatin profiles. Typical use cases include: (1) triming sequencing adapters, chromatin profiles. Typical use cases include: (1) trimming sequencing adapters, mapping bulk ATAC-seq or ChIP-seq genomic reads to the human genome and removing duplicates; (2) triming sequencing adapters, mapping single cell ATAC-seq genomic duplicates; (2) trimming sequencing adapters, mapping single cell ATAC-seq genomic reads to the human genome, correcting barcodes, removing duplicates and performing Tn5 shift; (3) split alignment of Hi-C reads against a reference genome. In all these three cases, Chromap is 10-20 times faster while being accurate. Loading
