Update citation information

If you use Chromap, please cite:

> Zhang, H., Song, L., Wang, X., Cheng, H., Wang, C., Meyer, C. A., ... & Li, H. (2021). Fast alignment and preprocessing of chromatin profiles with Chromap. Nature communications, 12(1), 1-6.

> Zhang, H., Song, L., Wang, X., Cheng, H., Wang, C., Meyer, C. A., ..., Liu, X. S., Li, H. (2021). Fast alignment and preprocessing of chromatin profiles with Chromap. Nature communications, 12(1), 1-6.

> https://doi.org/10.1038/s41467-021-26865-w

The summary file for QC is described in the manuscript:

> Ahmed, O., Zhang, H., Langmead, B., Song, L. (2025). Quality control of single-cell ATAC-seq data without peak calling using Chromap. Biorxiv.

> https://doi.org/10.1101/2025.07.15.664951

[bed]: https://genome.ucsc.edu/FAQ/FAQformat.html#format1

[paf]: https://github.com/lh3/miniasm/blob/master/PAF.md

[sam]: https://samtools.github.io/hts-specs/SAMv1.pdf

#include "temp_mapping.h"

#include "utils.h"

#define CHROMAP_VERSION "0.3.2-r517"

#define CHROMAP_VERSION "0.3.2-r518"

namespace chromap {