Loading README.md +1 −1 Original line number Diff line number Diff line Loading @@ -112,7 +112,7 @@ threshold to make a correction by setting **--bc-probability-threshold** (set to 0.9 by default) to a large value (e.g., 0.975) to only make reliable corrections. #### <a name="long-hic"></a>Map Hi-C short reads #### <a name="map-hic"></a>Map Hi-C short reads ```sh chromap --preset hic -x index -r ref.fa -1 read1.fa -2 read2.fa -o aln.pairs # Hi-C reads and pairs output Loading Loading
README.md +1 −1 Original line number Diff line number Diff line Loading @@ -112,7 +112,7 @@ threshold to make a correction by setting **--bc-probability-threshold** (set to 0.9 by default) to a large value (e.g., 0.975) to only make reliable corrections. #### <a name="long-hic"></a>Map Hi-C short reads #### <a name="map-hic"></a>Map Hi-C short reads ```sh chromap --preset hic -x index -r ref.fa -1 read1.fa -2 read2.fa -o aln.pairs # Hi-C reads and pairs output Loading
