Loading src/sam_mapping.h +2 −0 Original line number Diff line number Diff line Loading @@ -210,6 +210,8 @@ class SAMMapping : public Mapping { // We don't support Tn5 shift in SAM format because it has other fields that // depend mapping position. } // TODO(Haowen): I have to change the variable names or this function to make // the meaning consistent. bool IsPositiveStrand() const { return is_rev_ > 0 ? true : false; } // For now for convenience, we assume cigar should not be accessed after // generating the cigar string for output Loading Loading
src/sam_mapping.h +2 −0 Original line number Diff line number Diff line Loading @@ -210,6 +210,8 @@ class SAMMapping : public Mapping { // We don't support Tn5 shift in SAM format because it has other fields that // depend mapping position. } // TODO(Haowen): I have to change the variable names or this function to make // the meaning consistent. bool IsPositiveStrand() const { return is_rev_ > 0 ? true : false; } // For now for convenience, we assume cigar should not be accessed after // generating the cigar string for output Loading
