Add funcs to compute index, position, strand for Minimizer. (1c23c7e6) · Commits · github_fork / Chromap

src/minimizer.h

+13 −0

Original line number	Diff line number	Diff line
		@@ -3,6 +3,7 @@

		#include <utility>

		#include "hit.h"
		#include "strand.h"

		namespace chromap {
		@@ -22,6 +23,18 @@ class Minimizer {

		inline uint64_t GetHit() const { return hit_; }

		inline uint32_t GetSequenceIndex() const {
		return GenerateSequenceIndex(hit_);
		}

		inline uint32_t GetSequencePosition() const {
		return GenerateSequencePosition(hit_);
		}

		inline Strand GetSequenceStrand() const {
		return GenerateSequenceStrand(hit_);
		}

		inline bool operator<(const Minimizer &m) const {
		if (hash_key_ < m.hash_key_) {
		return true;