Unverified Commit 551318a8 authored by Sai Ma's avatar Sai Ma Committed by GitHub
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+1 −0
Original line number Diff line number Diff line
chr17	39840997	39850829

MyBlackList/README.txt

0 → 100644
+3 −0
Original line number Diff line number Diff line
# source
cp /raid/USRdirs/Buenrostro_data/02_20130527_singleCell/23_mitoBlackList/JDB_blacklist.bed hg19_blacklist.JDB.bed
cp /raid/USRdirs/Buenrostro_data/02_20130527_singleCell/23_mitoBlackList/mm9/JDB_blacklist.mm9.v2.bed mm9_blacklist.JDB.bed 
+437 −0
Original line number Diff line number Diff line
chr1	564215	570552
chr1	724136	727043
chr1	825006	825115
chr1	2583334	2634374
chr1	4363064	4363242
chr1	5725866	5736651
chr1	5910121	5910656
chr1	16839923	16841396
chr1	38077097	38077671
chr1	50482688	50483219
chr1	91852785	91853147
chr1	104163528	104164070
chr1	108112972	108113707
chr1	121351474	121487059
chr1	142535434	142543081
chr1	142723256	142723968
chr1	142792613	142793303
chr1	142835822	142837333
chr1	143274490	143284340
chr1	145277108	145277572
chr1	149033183	149035829
chr1	156186169	156186712
chr1	215672889	215673425
chr1	224199390	224204260
chr1	233318467	233318516
chr1	236260366	236260821
chr1	237766308	237766764
chr1	238104292	238104810
chr1	238105345	238105511
chr1	238106762	238107280
chr1	238107952	238108489
chr1	238108645	238109697
chr10	18841533	18862467
chr10	20035494	20037324
chr10	36722282	36723650
chr10	37890121	37890639
chr10	38772277	38819357
chr10	38868892	38889025
chr10	39076515	39155771
chr10	42354835	42548642
chr10	42596676	42602110
chr10	42661264	42667623
chr10	42790522	42818398
chr10	135498649	135502716
chr11	6831669	6831838
chr11	10529184	10532020
chr11	48671444	48902406
chr11	48931242	48964015
chr11	50318471	50784078
chr11	51090700	51374066
chr11	51567242	51594226
chr11	54694046	55027975
chr11	73221528	73222074
chr11	85194913	85195322
chr11	87524468	87525005
chr11	103275584	103281729
chr11	122874063	122874602
chr12	20704285	20704583
chr12	34372315	34372825
chr12	34432130	34857010
chr12	37989447	38441828
chr12	38531376	38531930
chr12	41757194	41757775
chr12	127650407	127651075
chr12	132061320	132062046
chr13	56545728	56545925
chr13	110076221	110076938
chr14	18999935	19056900
chr14	32953215	32954570
chr14	84637832	84639038
chr14	90341302	90341516
chr15	19999941	20044132
chr16	3421728	3422263
chr16	32493036	32570826
chr16	32590063	32598801
chr16	33237130	33241330
chr16	33864355	34023306
chr16	34180542	34197081
chr16	34530115	34542632
chr16	35193580	35285885
chr16	46385718	46456668
chr16	46497639	46500515
chr16	47538629	47539297
chr16	69392363	69392903
chr17	19355538	19356096
chr17	19502495	19506947
chr17	21905167	21906712
chr17	22018524	22032049
chr17	22221073	22263006
chr17	25263010	25268059
chr17	25415551	25417559
chr17	31149365	31149981
chr17	33478114	33478372
chr17	41381502	41382591
chr17	41463538	41464075
chr17	41464478	41465015
chr17	41465562	41467288
chr17	51182904	51183994
chr17	55868618	55868752
chr17	75158031	75158430
chr17	78591153	78591671
chr18	96416	97552
chr18	105658	112233
chr18	2842017	2842573
chr18	15393801	15393992
chr18	18510894	18520356
chr18	44126235	44126593
chr18	45379393	45380009
chr18	50319086	50319301
chr18	59541728	59542261
chr18	77772846	77773065
chr19	246006	247844
chr19	22877614	22877696
chr19	23235030	23235504
chr19	24182398	24186210
chr19	24385474	24633168
chr19	27730611	28262682
chr19	36066445	36066810
chr19	36756398	36800948
chr19	37759473	37797722
chr19	44914313	44916340
chr19	44960681	44962681
chr2	739925	740994
chr2	33992287	33992840
chr2	49456527	49457216
chr2	88124159	88125119
chr2	89830421	89880514
chr2	90371401	90394776
chr2	90443001	90545431
chr2	91595080	91616015
chr2	92267428	92326280
chr2	95564651	95565190
chr2	115695017	115695281
chr2	117780922	117781440
chr2	132966248	132989300
chr2	132994855	133007983
chr2	133011824	133013298
chr2	133036250	133040042
chr2	133044095	133045945
chr2	143846143	143846679
chr2	143848503	143848792
chr2	148022533	148023068
chr2	149639082	149639670
chr2	156120282	156120806
chr2	162135000	162139241
chr2	212640605	212641123
chr2	227586739	227587272
chr2	230045426	230045796
chr20	9149320	9149861
chr20	26257032	26320267
chr20	29517710	29521147
chr20	29803876	29833334
chr20	55933958	55934493
chr20	55935107	55935648
chr20	62916702	62918053
chr21	9647205	9648529
chr21	9694896	9704962
chr21	9825451	9845233
chr21	9881895	9882569
chr21	10084922	10088004
chr21	10492633	10493292
chr21	10599428	10599915
chr21	10697886	10860890
chr21	11186054	11188131
chr21	14338127	14369791
chr21	18800575	18800997
chr21	27228003	27228242
chr21	46795901	46796439
chr22	16847814	16862659
chr22	18876789	18884510
chr22	36281479	36282013
chr3	25508897	25509131
chr3	68708013	68708531
chr3	73159606	73161131
chr3	75696297	75699304
chr3	75717841	75720426
chr3	80995858	81014459
chr3	90311686	90507410
chr3	93504815	93519133
chr3	96335833	96337558
chr3	160665192	160665814
chr3	196625514	196625860
chr3	197825427	197834080
chr4	9987	12694
chr4	12276463	12292424
chr4	12641862	12642305
chr4	21583630	21583719
chr4	27731857	27732439
chr4	47774093	47774614
chr4	49085372	49342114
chr4	49488472	49662085
chr4	52659961	52688986
chr4	56194076	56194696
chr4	65473624	65474162
chr4	68264186	68266830
chr4	70296565	70296841
chr4	76807083	76807320
chr4	78929488	78930103
chr4	93622884	93623402
chr4	117219155	117219678
chr4	129002631	129003176
chr4	156383228	156383746
chr4	156384860	156387314
chr4	163342349	163342899
chr4	190190746	190203442
chr4	190801869	190802909
chr4	190943802	190943962
chr4	190987268	190990949
chr4	191026302	191044344
chr5	8622399	8622932
chr5	17517177	17600940
chr5	21477365	21497415
chr5	34177882	34197574
chr5	45908253	46411114
chr5	49405493	49554574
chr5	60057115	60057667
chr5	71146650	71146996
chr5	79945623	79948246
chr5	93903068	93906726
chr5	97746525	97746679
chr5	99381556	99390873
chr5	105888898	105889439
chr5	123096715	123097256
chr5	134258843	134264404
chr5	165957179	165957715
chr5	174541634	174542177
chr6	58735349	58739031
chr6	58745955	58780547
chr6	61880095	61944008
chr6	62189892	62206612
chr6	62207809	62230644
chr6	62283796	62284581
chr6	133593944	133594201
chr6	137059142	137059326
chr6	150665074	150665281
chr6	153990090	153990608
chr6	157731310	157735525
chr7	43878355	43878530
chr7	45291345	45291903
chr7	56437808	56442977
chr7	57253832	57254366
chr7	57255103	57255635
chr7	57261829	57261998
chr7	57544726	57556913
chr7	57811488	57836990
chr7	57939184	58055539
chr7	61054285	62454680
chr7	64059157	64066183
chr7	64951348	64956223
chr7	68201328	68201864
chr7	68527370	68527788
chr7	80962907	80963147
chr7	100550640	100551321
chr7	141501784	141502302
chr7	141504814	141505351
chr7	142372972	142375689
chr7	145694182	145694771
chr8	155512	157639
chr8	21455971	21456306
chr8	32868808	32873375
chr8	43092737	43097573
chr8	43399486	43843604
chr8	46838215	47457541
chr8	47739043	47742896
chr8	47750844	47776101
chr8	56754955	56755418
chr8	68497449	68497998
chr8	69218401	69218922
chr8	70602248	70602620
chr8	77114045	77114579
chr8	100507848	100508386
chr9	10435	11574
chr9	4799734	4800000
chr9	5092549	5093067
chr9	5093519	5094054
chr9	33656606	33659367
chr9	42819021	42832395
chr9	44070617	44070871
chr9	44873123	44902307
chr9	45355954	45357644
chr9	45435109	45443517
chr9	66494170	66494805
chr9	66767710	66864329
chr9	66970914	67005594
chr9	67315122	67321036
chr9	67789868	67792893
chr9	68410775	68435115
chr9	69677073	69687998
chr9	69689770	69711497
chr9	69947961	70011196
chr9	70076144	70076855
chr9	70318723	70327683
chr9	72653073	72653572
chr9	78790077	78790255
chr9	79186574	79187026
chr9	83180398	83180922
chr9	141019938	141021783
chrX	55206111	55206740
chrX	55207562	55209273
chrX	55209430	55210229
chrX	58330488	58330843
chrX	58373806	58373962
chrX	58377680	58377864
chrX	58415350	58416387
chrX	58432411	58432680
chrX	58485887	58486241
chrX	58488898	58494528
chrX	58499466	58504235
chrX	58506076	58536883
chrX	58544061	58582415
chrX	61681834	61919683
chrX	62003205	62041580
chrX	83658929	83659019
chrX	108297348	108297886
chrX	110660052	110660589
chrX	114959057	115006437
chrX	125605550	125607502
chrX	125714985	125715338
chrX	125864844	125864980
chrX	125865542	125866081
chrY	313470	313613
chrY	3004989	3005175
chrY	4212571	4213142
chrY	7671817	7694928
chrY	7726064	7730229
chrY	7730734	7731598
chrY	7735811	7752887
chrY	7785067	7806311
chrY	7806856	7814704
chrY	7815230	7820478
chrY	7829937	7832032
chrY	7832744	7848695
chrY	7870343	7873582
chrY	7874115	7874584
chrY	7875409	7885257
chrY	7886545	7894591
chrY	7898927	7916812
chrY	7918790	7921352
chrY	7926344	7936705
chrY	7941130	7947438
chrY	7948790	7964448
chrY	8179010	8181143
chrY	8181757	8213330
chrY	8214629	8215637
chrY	8220421	8230061
chrY	8230686	8231546
chrY	8240772	8265916
chrY	8291535	8292942
chrY	8294002	8295175
chrY	8296944	8321375
chrY	8325813	8325929
chrY	8326678	8333466
chrY	8334027	8342387
chrY	8356544	8369346
chrY	8909560	8909925
chrY	8979254	8979818
chrY	9072781	9072993
chrY	9908430	9925608
chrY	9981952	9982126
chrY	10034864	10036712
chrY	10040627	10045657
chrY	10047773	10052533
chrY	10053695	10057722
chrY	10059394	10073694
chrY	10075082	10075781
chrY	10080736	10104539
chrY	13104530	13144368
chrY	13193966	13196535
chrY	13252193	13259484
chrY	13445957	13490591
chrY	13642186	13749784
chrY	13798522	13870984
chrY	19691913	19692524
chrY	19764063	19776198
chrY	19780600	19781704
chrY	19783669	19796396
chrY	19800068	19801419
chrY	19808085	19817100
chrY	19944298	19944581
chrY	20235195	20235478
chrY	20362679	20371694
chrY	20378360	20379711
chrY	20383383	20396110
chrY	20398075	20399179
chrY	20403581	20415713
chrY	20487248	20487859
chrY	23124788	23125577
chrY	23149027	23151205
chrY	23157969	23158245
chrY	23159001	23167737
chrY	23178886	23181770
chrY	23220740	23223625
chrY	23234125	23235822
chrY	23236898	23248080
chrY	23248729	23248851
chrY	23899295	23899388
chrY	23956449	23956628
chrY	24247659	24247700
chrY	24630999	24631040
chrY	24953159	24975657
chrY	24980997	24991235
chrY	25022753	25039185
chrY	25040153	25042421
chrY	25048332	25059258
chrY	25060235	25064798
chrY	25099139	25121882
chrY	25122419	25160800
chrY	25182404	25192372
chrY	25217722	25219409
chrY	25493588	25495275
chrY	26148315	26148450
chrY	26586905	26609405
chrY	26614745	26624983
chrY	26656502	26672934
chrY	26673902	26676170
chrY	26682081	26693007
chrY	26693984	26698547
chrY	26732883	26755623
chrY	26756160	26794538
chrY	26816148	26826116
chrY	26851466	26853153
chrY	27109247	27110934
chrY	27136281	27146249
chrY	27167859	27206241
chrY	27206778	27229502
chrY	27263848	27268411
chrY	27269388	27280315
chrY	27286226	27288494
chrY	27289462	27305895
chrY	27337415	27347656
chrY	27352996	27375497
chrY	27813984	27814119
chrY	28555026	28555353
chrY	28784129	28819695
chrY	58819367	58917648
chrY	58971913	58997782
chrY	59361267	59362785
+38 −0
Original line number Diff line number Diff line
chr10	38528030	38529790
chr10	42070420	42070660
chr16	34571420	34571640
chr16	34572700	34572930
chr16	34584530	34584840
chr16	34585000	34585220
chr16	34585700	34586380
chr16	34586660	34587100
chr16	34587060	34587660
chr16	34587900	34588170
chr16	34593000	34593590
chr16	34594490	34594720
chr16	34594900	34595150
chr16	34595320	34595570
chr16	46380910	46381140
chr16	46386270	46386530
chr16	46390180	46390930
chr16	46394370	46395100
chr16	46395670	46395910
chr16	46398780	46399020
chr16	46400700	46400970
chr1	124450730	124450960
chr20	28513520	28513770
chr20	31060210	31060770
chr20	31061050	31061560
chr20	31063990	31064490
chr20	31067930	31069060
chr20	31069000	31069280
chr21	8219780	8220120
chr21	8234330	8234620
chr2	90397520	90397900
chr2	90398120	90398760
chr3	93470260	93470870
chr4	49118760	49119010
chr4	49120790	49121130
chr5	49601430	49602300
chr5	49657080	49657690
chr5	49661330	49661570
+28 −0
Original line number Diff line number Diff line
chr1	24611291	24616433
chr1	34752816	34753334
chr1	132790750	132791529
chr10	85025724	85026338
chr10	96077274	96078136
chr11	44386975	44387493
chr11	90538563	90539387
chr12	59262722	59263346
chr12	97061178	97062037
chr12	112934160	112934694
chr13	85126311	85127733
chr17	93680439	93680973
chr18	65119609	65120234
chr18	65837078	65837630
chr2	22587038	22590784
chr2	69355287	69355915
chr3	6049482	6050005
chr3	94334365	94334904
chr4	80002347	80004537
chr4	80004623	80005450
chr5	7276597	7277547
chr5	35634042	35634582
chr5	60042469	60043298
chr6	9889695	9890404
chr6	79817909	79818596
chr8	102024408	102024950
chr9	24744883	24745417
chr9	123107115	123107664
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