v1.39.0 (8af7176b) · Commits · github_fork / Homer3

DataTree/AcquiredData/Snirf/SnirfClass.m

+0 −5

Original line number	Diff line number	Diff line
		@@ -328,11 +328,6 @@ classdef SnirfClass < AcqDataClass & FileLoadSaveClass
		% Copy mutable properties to new object instance;
		objnew.stim = CopyHandles(obj.stim);
		objnew.SortStims();

		if strcmp(options, 'extended')
		t = obj.GetTimeCombined();
		objnew.data = DataClass([],t,[]);
		end
		end

deleted100644 → 0

+0 −3

Original line number	Diff line number	Diff line
		function ml_struct = InitMeasLists()

		ml_struct = struct('MeasList',[], 'MeasListVis',[], 'MeasListActMan',[], 'MeasListActAuto',[]);
		No newline at end of file

+0 −25

Original line number	Diff line number	Diff line
		@@ -241,31 +241,6 @@ classdef ProcInputClass < handle
		end


		% ----------------------------------------------------------------------------------
		function ml = GetMeasListVis(obj, iBlk)
		if ~exist('iBlk','var')
		iBlk = 1;
		end
		if ~isempty(obj.mlVis)
		ml = obj.mlVis{iBlk};
		else
		ml = [];
		end
		end


		% ----------------------------------------------------------------------------------
		function SetMeasListVis(obj, ml, iBlk)
		if ~exist('iBlk','var')
		iBlk = 1;
		end
		if isempty(obj.mlVis)
		obj.mlVis{iBlk} = ml;
		elseif length(obj.mlVis{iBlk}) == length(ml)
		obj.mlVis{iBlk} = ml;
		end
		end

		% ----------------------------------------------------------------------------------
		function n = GetDataBlocksNum(obj)
		n = length(obj.tIncMan);

+1 −14

Original line number	Diff line number	Diff line
		@@ -25,16 +25,12 @@ classdef ProcStreamClass < handle
		obj.config = struct('procStreamCfgFile','', 'defaultProcStream','','suffix','');
		obj.config.procStreamCfgFile = cfg.GetValue('Processing Stream Config File');
		obj.config.regressionTestActive = cfg.GetValue('Regression Test Active');
		copyOptions = '';
		if strcmpi(obj.getDefaultProcStream(), '_nirs')
		copyOptions = 'extended';
		end

		% By the time this class constructor is called we should already have a saved registry
		% to load. (Defintiely would not want to be generating the registry for each instance of this class!!)
		obj.reg = RegistriesClass();

		obj.input = ProcInputClass(acquired, copyOptions);
		obj.input = ProcInputClass(acquired);
		obj.output = ProcResultClass();

		if nargin==0
		@@ -1480,15 +1476,6 @@ classdef ProcStreamClass < handle
		end


		% ----------------------------------------------------------------------------------
		function mlVis = GetMeasListVis(obj, iBlk)
		if ~exist('iBlk','var')
		iBlk = [];
		end
		mlVis = obj.input.GetVar('mlVis',iBlk);
		end


		% ----------------------------------------------------------------------------------
		function pValues = GetPvalues(obj, iBlk)
		if ~exist('iBlk','var')

+0 −5

Original line number	Diff line number	Diff line
		@@ -458,7 +458,6 @@ classdef RunClass < TreeNodeClass
		ch.MeasList = obj.acquired.GetMeasList(iBlk);
		ch.MeasListActMan = obj.procStream.GetMeasListActMan(iBlk);
		ch.MeasListActAuto = obj.procStream.GetMeasListActAuto(iBlk);
		ch.MeasListVis = obj.procStream.GetMeasListVis(iBlk);
		if isempty(ch.MeasListActMan)
		obj.InitMlActMan(); % TODO find a more sensical place to do this
		ch.MeasListActMan = obj.procStream.GetMeasListActMan(iBlk);
		@@ -466,10 +465,6 @@ classdef RunClass < TreeNodeClass
		if isempty(ch.MeasListActAuto)
		ch.MeasListActAuto = ones(size(ch.MeasList,1),1);
		end
		if isempty(ch.MeasListVis)
		obj.InitMlVis();
		ch.MeasListVis = obj.procStream.GetMeasListVis(iBlk);
		end
		ch.MeasListAct = bitand(ch.MeasListActMan, ch.MeasListActMan);
		end