fq was not defined yet so moved the call to line afterwards (838c58d3) · Commits · github_fork / Homer3

FuncRegistry/UserFunctions/tcca_glm/hmrR_tCCA.m

+4 −1

Original line number	Diff line number	Diff line
		@@ -64,7 +64,6 @@ flag_conc = true; % if 1 CCA inputs are in conc, if 0 CCA inputs are in intensit
		% tCCA parameters
		param.tau = tCCAparams(2); %stepsize for embedding in samples (tune to sample frequency!)
		timelag = tCCAparams(1);
		param.NumOfEmb = ceil(timelag*fq / sts);
		param.ct = 0; % correlation threshold for rtcca function, set here to 0 (will be applied later)
		% correlation used outside of the rtcc function
		ctr = tCCAparams(3);
		@@ -131,6 +130,10 @@ if flagtCCA

		%% Perform CCA on training data
		X = d_long;

		%%
		param.NumOfEmb = ceil(timelag*fq / sts);

		%% tCCA with shrinkage
		[REG, ADD] = rtcca(X,AUX,param,flags);
		%% save and output tCCA filter.