Commit 78b40e4e authored by Jay Dubb's avatar Jay Dubb
Browse files

Merge branch 'development' of https://github.com/BUNPC/Homer3 into development

parents 68dd365e 33c57d6c
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+8 −6
Original line number Original line Diff line number Diff line
@@ -61,7 +61,7 @@ function [exs,varargout] = GetExtinctions( lambda,WhichSpectrum )
%	To convert this data to absorption coefficient in (cm-1), multiply
%	To convert this data to absorption coefficient in (cm-1), multiply
%	by the molar concentration and 2.303,
%	by the molar concentration and 2.303,
%
%
%	µa = (2.303) e (x g/liter)/(66,500 g Hb/mole)
%	µa = (2.303) e (x g/liter)/(66,500 g Hb/mole)
%	where x is the number of grams per liter. A typical value of x
%	where x is the number of grams per liter. A typical value of x
%	for whole blood is x=150 g Hb/liter.
%	for whole blood is x=150 g Hb/liter.
%
%
@@ -117,6 +117,8 @@ function [exs,varargout] = GetExtinctions( lambda,WhichSpectrum )
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%


lambda = double(lambda);  % Cast to double

num_lambda = length(lambda);
num_lambda = length(lambda);




@@ -152,7 +154,7 @@ switch(WhichSpectrum)
        % using 66,500 as the gram molecular weight of hemoglobin.
        % using 66,500 as the gram molecular weight of hemoglobin.
        % To convert this data to absorption coefficient in (cm-1), multiply by the molar concentration and 2.303,
        % To convert this data to absorption coefficient in (cm-1), multiply by the molar concentration and 2.303,
        %
        %
        % µa = (2.303) e (x g/liter)/(66,500 g Hb/mole)
        % µa = (2.303) e (x g/liter)/(66,500 g Hb/mole)
        % where x is the number of grams per liter. A typical value of x for whole blood is x=150 g Hb/liter.
        % where x is the number of grams per liter. A typical value of x for whole blood is x=150 g Hb/liter.


        vLambdaHbOHb = [
        vLambdaHbOHb = [
@@ -309,7 +311,7 @@ switch(WhichSpectrum)
        %using 66,500 as the gram molecular weight of hemoglobin.
        %using 66,500 as the gram molecular weight of hemoglobin.
        %To convert this data to absorption coefficient in (cm-1), multiply by the molar concentration and 2.303,
        %To convert this data to absorption coefficient in (cm-1), multiply by the molar concentration and 2.303,
        %
        %
        %µa = (2.303) e (x g/liter)/(66,500 g Hb/mole)
        %µa = (2.303) e (x g/liter)/(66,500 g Hb/mole)
        %where x is the number of grams per liter. A typical value of x for whole blood is x=150 g Hb/liter.
        %where x is the number of grams per liter. A typical value of x for whole blood is x=150 g Hb/liter.


        vLambdaHbOHb = [
        vLambdaHbOHb = [
@@ -717,7 +719,7 @@ switch(WhichSpectrum)
        % using 66,500 as the gram molecular weight of hemoglobin.
        % using 66,500 as the gram molecular weight of hemoglobin.
        % To convert this data to absorption coefficient in (cm-1), multiply by the molar concentration and 2.303,
        % To convert this data to absorption coefficient in (cm-1), multiply by the molar concentration and 2.303,
        %
        %
        % µa = (2.303) e (x g/liter)/(66,500 g Hb/mole)
        % µa = (2.303) e (x g/liter)/(66,500 g Hb/mole)


        vLambdaHbOHb = [ 630 680	4280;
        vLambdaHbOHb = [ 630 680	4280;
            640	440	3640;
            640	440	3640;
@@ -779,7 +781,7 @@ switch(WhichSpectrum)
        % using 66,500 as the gram molecular weight of hemoglobin.
        % using 66,500 as the gram molecular weight of hemoglobin.
        % To convert this data to absorption coefficient in (cm-1), multiply by the molar concentration and 2.303,
        % To convert this data to absorption coefficient in (cm-1), multiply by the molar concentration and 2.303,
        %
        %
        % µa = (2.303) e (x g/liter)/(66,500 g Hb/mole)
        % µa = (2.303) e (x g/liter)/(66,500 g Hb/mole)
        % where x is the number of grams per liter. A typical value of x for whole blood is x=150 g Hb/liter.
        % where x is the number of grams per liter. A typical value of x for whole blood is x=150 g Hb/liter.


        vLambdaHbOHb = [450	68000	58000;
        vLambdaHbOHb = [450	68000	58000;
@@ -857,7 +859,7 @@ end
%
%
% ABSORPTION SPECTRUMOF H20
% ABSORPTION SPECTRUMOF H20
% FROM G. M. Hale and M. R. Querry, "Optical constants of water in the 200nm to
% FROM G. M. Hale and M. R. Querry, "Optical constants of water in the 200nm to
% 200µm wavelength region," Appl. Opt., 12, 555--563, (1973).
% 200µm wavelength region," Appl. Opt., 12, 555--563, (1973).
%
%
% ON THE WEB AT
% ON THE WEB AT
% http://omlc.ogi.edu/spectra/water/abs/index.html
% http://omlc.ogi.edu/spectra/water/abs/index.html