Commit 1138b19f authored by Meryem Ayse Yucel's avatar Meryem Ayse Yucel
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CCA shrinkage back on

parent c6ea346a
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+1 −2
Original line number Diff line number Diff line
@@ -76,8 +76,7 @@ function [Aaux, rcMap] = hmrR_tCCA(data, aux, probe, runIdx, subjIdx, mlActMan,
%% flags and tCCA settings
tCCAaux_inx = find(tCCAaux_inx); % Convert flags to list of indices
flags.pcaf =  [0 0]; % no pca of X or AUX
% flags.shrink = true; % perform shrinkage in the CCA
flags.shrink = false;  % JD: set to false because rtcca generate error, "Undefined function or variable 'cshrink'".
flags.shrink = true; % perform shrinkage in the CCA
% flagICRegressors - selects regressor generation strategy. (0/false) chooses a common set
% of regressors for all fNIRS channels. (1/true) generates one individual
% regressor per fNIRS channel. This feature is currently under development,