#' @return `DRIM` object with the key results, that can be used in the DTUrtle steps hereafter. The object is just a easily accesible list with the following items:
#' @return `DRIM` object with the key results, that can be used in the DTUrtle steps hereafter. The object is just a easily accesible list with the following items:
#' - `drim`: The results of the DRIMSeq statistical computations (`dmTest()`).
#' - `drim`: The results of the DRIMSeq statistical computations (`dmTest()`).
#' - `design_full`: The design matrix generated from the specified `pd` columns
#' - `design_full`: The design matrix generated from the specified `pd` columns.
#' - `cond_levels`: A copy of the specified comparison groups.
#' - `cond_levels`: A copy of the specified comparison groups.
#' - `group`: ?
#' - `group`: Vector which sample/cell belongs to which comparison group.
#' - `pct_exp_tx`: Data frame of the expressed-in percentage of all transcripts. [TODO: split by group?]
#' - `pct_exp_tx`: Data frame of the expressed-in percentage of all transcripts. [TODO: split by group?]
#' - `pct_exp_gene`: Data frame of the expressed-in percentage of all genes. [TODO: split by group?]
#' - `pct_exp_gene`: Data frame of the expressed-in percentage of all genes. [TODO: split by group?]
\code{DRIM} object with the key results, that can be used in the DTUrtle steps hereafter. The object is just a easily accesible list with the following items:
\code{DRIM} object with the key results, that can be used in the DTUrtle steps hereafter. The object is just a easily accesible list with the following items:
\itemize{
\itemize{
\item \code{drim}: The results of the DRIMSeq statistical computations (\code{dmTest()}).
\item \code{drim}: The results of the DRIMSeq statistical computations (\code{dmTest()}).
\item \code{design_full}: The design matrix generated from the specified \code{pd} columns
\item \code{design_full}: The design matrix generated from the specified \code{pd} columns.
\item \code{cond_levels}: A copy of the specified comparison groups.
\item \code{cond_levels}: A copy of the specified comparison groups.
\item \code{group}: ?
\item \code{group}: Vector which sample/cell belongs to which comparison group.
\item \code{pct_exp_tx}: Data frame of the expressed-in percentage of all transcripts. \link{TODO: split by group?}
\item \code{pct_exp_tx}: Data frame of the expressed-in percentage of all transcripts. \link{TODO: split by group?}
\item \code{pct_exp_gene}: Data frame of the expressed-in percentage of all genes. \link{TODO: split by group?}
\item \code{pct_exp_gene}: Data frame of the expressed-in percentage of all genes. \link{TODO: split by group?}
