Commit eb69e86d authored by Chris Cheshire's avatar Chris Cheshire
Browse files

Updated version output

parent 30707ace

modules/local/modules/calculate_frip/main.nf

+1 −1
Original line number Diff line number Diff line
@@ -29,7 +29,7 @@ process CALCULATE_FRIP { 
    "${task.process}":

        python: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\")

        deeptools: \$(deeptools --version | sed -e "s/deeptools //g")

        pysam: pip freeze | grep pysam | sed -e "s/pysam==//g"

        pysam: \$(python -c 'import pysam; print(pysam.__version__)')

    END_VERSIONS

    """

}

modules/local/modules/calculate_peak_reprod/main.nf

+3 −0
Original line number Diff line number Diff line
@@ -27,6 +27,9 @@ process CALCULATE_PEAK_REPROD { 
    cat <<-END_VERSIONS > versions.yml

    "${task.process}":

        python: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\")

        dask: \$(python -c 'import dask; print(dask.__version__)')

        numpy: \$(python -c 'import numpy; print(numpy.__version__)')

        pandas: \$(python -c 'import pandas; print(pandas.__version__)')

    END_VERSIONS

    """

}

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