Commit d107de66 authored by Tamara Hodgetts's avatar Tamara Hodgetts
Browse files

changed include statements of all local modules

parent d0443cb1

modules/local/bedtools_genomecov_scale.nf

+1 −1
Original line number Diff line number Diff line 
// Import generic module functions

include { initOptions; saveFiles; getSoftwareName } from './common/functions'

include { initOptions; saveFiles; getSoftwareName; getProcessName } from './common/functions'



params.options = [:]

options        = initOptions(params.options)

modules/local/export_meta.nf

+1 −1
Original line number Diff line number Diff line 
include { initOptions; saveFiles; getSoftwareName } from './common/functions'

include { initOptions; saveFiles; getSoftwareName; getProcessName } from './common/functions'



params.options = [:]

options        = initOptions(params.options)

modules/local/get_chrom_sizes.nf

+1 −1
Original line number Diff line number Diff line 
// Import generic module functions

include { initOptions; saveFiles } from './common/functions'

include { initOptions; saveFiles; getSoftwareName; getProcessName } from './common/functions'



params.options = [:]

options        = initOptions(params.options)

modules/local/linux/awk.nf

+1 −1
Original line number Diff line number Diff line 
include { initOptions; saveFiles; getSoftwareName } from '../common/functions'

include { initOptions; saveFiles; getSoftwareName; getProcessName } from '../common/functions'



params.options   = [:]

options          = initOptions(params.options)

modules/local/linux/awk_script.nf

+2 −1
Original line number Diff line number Diff line 
include { initOptions; saveFiles; getSoftwareName } from '../common/functions'

include { initOptions; saveFiles; getSoftwareName; getProcessName } from '../common/functions'





params.options = [:]

options    = initOptions(params.options)

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