bug fixes - replicate called correctly now

        # create pyranges objects and fill df

        unique_groups = self.seacr_beds.group.unique()

        print(unique_groups)

        unique_replicates = self.seacr_beds.replicate.unique()

        self.replicate_number = 1

        self.multiple_reps = True

            for i in list(range(len(unique_groups))):

                group_i = unique_groups[i]

                group_reps = len(self.seacr_beds_group_rep[self.seacr_beds_group_rep['group'] == group_i])

                print(group_reps)

                if group_reps < 2:

                    continue

                rep_permutations = array_permutate(range(group_reps))

                    pyr_query = pr.PyRanges()

                    rep_perm = rep_permutations[k]

                    for j in rep_perm:

                        rep_i = range(group_reps)[j]

                        rep_i = "R" + str(range(group_reps)[j]+1)

                        peaks_i = self.seacr_beds[(self.seacr_beds['group']==group_i) & (self.seacr_beds['replicate']==rep_i)]

                        pyr_subject = pr.PyRanges(chromosomes=peaks_i['chrom'], starts=peaks_i['start'], ends=peaks_i['end'])

                        print("gothere")

                        if(len(pyr_query) > 0):

                            pyr_overlap = pyr_query.join(pyr_subject)

                            pyr_overlap = pyr_overlap.apply(lambda df: df.drop(['Start_b','End_b'], axis=1))

                    if (pyr_query.empty):

                        self.reprod_peak_stats.at[idx_count, 'no_peaks_reproduced'] = 0

                    else :

                        pyr_starts = pyr_query.values()[0]['Start']

                        unique_pyr_starts = pyr_starts.unique()