Commit 5dd2e166 authored by Chris Cheshire's avatar Chris Cheshire
Browse files

Work around for streaming of tar file to github actions failing.

parent 7c49965a

conf/test.config

+1 −1
Original line number Diff line number Diff line
@@ -29,7 +29,7 @@ params { 
    gene_bed           = 'https://raw.githubusercontent.com/nf-core/test-datasets/cutandrun/reference/genomes/hg38-chr20-genes.bed.gz'

    blacklist          = "${projectDir}/assets/blacklists/hg38-blacklist.bed"

    spikein_fasta      = 'https://raw.githubusercontent.com/nf-core/test-datasets/cutandrun/reference/genomes/e_coli_U00096_3.fa.gz'

    spikein_bowtie2    = 'https://raw.githubusercontent.com/nf-core/test-datasets/cutandrun/reference/genomes/e_coli_U00096_3.tar.gz'

    //spikein_bowtie2    = 'https://raw.githubusercontent.com/nf-core/test-datasets/cutandrun/reference/genomes/e_coli_U00096_3.tar.gz'



    minimum_alignment_q_score = 10

}
 
 No newline at end of file

conf/test_full_small.config

+1 −1
Original line number Diff line number Diff line
@@ -17,7 +17,7 @@ params { 
    gene_bed           = 'https://raw.githubusercontent.com/nf-core/test-datasets/cutandrun/reference/genomes/hg38-chr20-genes.bed.gz'

    blacklist          = "${projectDir}/assets/blacklists/hg38-blacklist.bed"

    spikein_fasta      = 'https://raw.githubusercontent.com/nf-core/test-datasets/cutandrun/reference/genomes/e_coli_U00096_3.fa.gz'

    spikein_bowtie2    = 'https://raw.githubusercontent.com/nf-core/test-datasets/cutandrun/reference/genomes/e_coli_U00096_3.tar.gz'

    //spikein_bowtie2    = 'https://raw.githubusercontent.com/nf-core/test-datasets/cutandrun/reference/genomes/e_coli_U00096_3.tar.gz'



    minimum_alignment_q_score = 10

}

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