Loading modules/local/python/get_software_versions.nf→modules/local/get_software_versions.nf +1 −1 Original line number Diff line number Diff line // Import generic module functions include { initOptions; saveFiles } from '../common/functions' include { initOptions; saveFiles } from 'common/functions' params.options = [:] options = initOptions(params.options) Loading workflows/cutandrun.nf +13 −13 Original line number Diff line number Diff line Loading @@ -305,7 +305,7 @@ include { CALCULATE_PEAK_REPROD } from "../modules/local/modules/calcu include { EXPORT_META } from "../modules/local/export_meta" addParams( options: modules["export_meta"] ) include { EXPORT_META as EXPORT_META_CTRL } from "../modules/local/export_meta" addParams( options: modules["export_meta"] ) include { GENERATE_REPORTS } from "../modules/local/python/generate_reports" addParams( options: modules["generate_reports"] ) include { GET_SOFTWARE_VERSIONS } from "../modules/local/python/get_software_versions" addParams( options: [publish_files : ["csv":""]] ) include { GET_SOFTWARE_VERSIONS } from "../modules/local/get_software_versions" addParams( options: [publish_files : ["csv":""]] ) include { MULTIQC } from "../modules/local/multiqc" addParams( options: multiqc_options ) /* Loading Loading
modules/local/python/get_software_versions.nf→modules/local/get_software_versions.nf +1 −1 Original line number Diff line number Diff line // Import generic module functions include { initOptions; saveFiles } from '../common/functions' include { initOptions; saveFiles } from 'common/functions' params.options = [:] options = initOptions(params.options) Loading
workflows/cutandrun.nf +13 −13 Original line number Diff line number Diff line Loading @@ -305,7 +305,7 @@ include { CALCULATE_PEAK_REPROD } from "../modules/local/modules/calcu include { EXPORT_META } from "../modules/local/export_meta" addParams( options: modules["export_meta"] ) include { EXPORT_META as EXPORT_META_CTRL } from "../modules/local/export_meta" addParams( options: modules["export_meta"] ) include { GENERATE_REPORTS } from "../modules/local/python/generate_reports" addParams( options: modules["generate_reports"] ) include { GET_SOFTWARE_VERSIONS } from "../modules/local/python/get_software_versions" addParams( options: [publish_files : ["csv":""]] ) include { GET_SOFTWARE_VERSIONS } from "../modules/local/get_software_versions" addParams( options: [publish_files : ["csv":""]] ) include { MULTIQC } from "../modules/local/multiqc" addParams( options: multiqc_options ) /* Loading
