Commit 5b990659 authored by Charlotte West's avatar Charlotte West
Browse files

reduced code

parent 2f02f648
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+1 −2
Original line number Diff line number Diff line
@@ -399,8 +399,7 @@ workflow CUTANDRUN {
    ch_samtools_bam
        .map { row ->
            def denominator = row[0].find{ it.key == "bt2_total_aligned_spikein" }?.value.toInteger()
            denominator = (denominator != 0 ? denominator : 1)
            [ row[0].id, params.normalisation_c / denominator ]
            [ row[0].id, params.normalisation_c / (denominator != 0 ? denominator : 1) ]
        }
        .set { ch_scale_factor }
    // EXAMPLE CHANNEL STRUCT: [id, scale_factor]