Commit 1594991d authored by Chris Cheshire's avatar Chris Cheshire
Browse files

Fixed align intermed tests

parent 940fe412

tests/test_verify_output_align_intermed.yml

+2 −2
Original line number Diff line number Diff line 
- name: test_verify_output_align_intermed

  command: nextflow run main.nf -profile docker,test --only_filtering true --skip_fastqc true --save_align_intermed true -c tests/config/nextflow.config

  command: nextflow run main.nf -profile docker,test --only_peak_calling true --skip_fastqc true --save_align_intermed true -c tests/config/nextflow.config

  tags:

    - verify_output

    - verify_output_align

    - verify_output_align_short

    - verify_output_align_long

    - verify_output_align_intermed

  files:

    - path: results/02_alignment/bowtie2/target/intermed/align/h3k27me3_R1.target.sorted.bam

tests/test_verify_output_save_unaligned.yml

+1 −1
Original line number Diff line number Diff line
@@ -3,7 +3,7 @@ 
  tags:

    - verify_output

    - verify_output_align

    - verify_output_align_long

    - verify_output_align_short

    - verify_output_align_save_unaligned

  files:

    - path: results/02_alignment/bowtie2/target/h3k27me3_R1.target.unmapped_1.fastq.gz

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