Commit d9c6c9c1 authored by nchernia's avatar nchernia Committed by GitHub
Browse files

juicer tools

parent aea6bfaa

AWS/scripts/juicer_hiccups.sh

+1 −1
Changes for AWS/scripts/juicer_hiccups.sh: 1 added line, 1 removed line.
Original line number Diff line number Diff line
@@ -37,7 +37,7 @@ printHelpAndExit() { 
#set defaults

genomeID="hg19"

hic_file_path="$(pwd)/aligned/inter_30.hic"

juiceboxpath="/opt/juicer/scripts/juicebox"

juiceboxpath="/opt/juicer/scripts/juicer_tools"

bed_file_dir="/opt/juicer/references/motif"



while getopts "h:g:j:i:m:" opt; do

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