Commit c69dc65b authored by Chaos's avatar Chaos
Browse files

fix a bug in merging bam files

parent 7534b4e0

hic_local.sh

+12 −10
Original line number Diff line number Diff line
@@ -182,6 +182,7 @@ do 
				$genome_size_file

	fi



	if [ ! -e $rep_hic ];then

		$hic_tools \

			pre \

				--threads $thread_str \
@@ -190,8 +191,9 @@ do 
				-i $rep_dedup_index_txt \

				-t $tmp_dir \

				$rep_dedup_txt \

			${out_dir}/${rep}.hic \

				$rep_hic \

				$genome_size_file

	fi

done

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