Commit bce30cba authored by Chaos's avatar Chaos
Browse files

fix a bug in ligation count

parent 22454dc5

hic_local.sh

+2 −3
Original line number Diff line number Diff line
@@ -50,9 +50,8 @@ do 


	if [ ! -e $linecount_file ];then

		num2=$(\

			gunzip \

			-c \

			$read1_file | \

			gunzip -c $read1_file | \

			wc -l \

			$awk_cmd '{print $1}'\

		)

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