Commit 8134bcec authored by Aiden Lab's avatar Aiden Lab Committed by GitHub
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nofrag

parent 8536fa8f
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+1 −0
Original line number Diff line number Diff line
@@ -83,6 +83,7 @@ genomeID="hg19"
shortreadend=0
# description, default empty
about=""
nofrag=0

## Read arguments                                                     
usageHelp="Usage: ${0##*/} [-g genomeID] [-d topDir] [-s site] [-a about] [-R end]\n                 [-S stage] [-p chrom.sizes path] [-y restriction site file]\n                 [-z reference genome file] [-D Juicer scripts directory]\n                 [-r] [-h] [-x]"