Fix error filename (76c63a19) · Commits · Chaos / chaos.juicer

misc/generate_site_positions.py

+3 −3

Original line number	Diff line number	Diff line
		@@ -21,7 +21,9 @@ else:
		sys.exit(1)

		genome=sys.argv[2]
		if genome == 'hg19':
		if len(sys.argv) == 4:
		filename=sys.argv[3]
		elif genome == 'hg19':
		filename='/seq/references/Homo_sapiens_assembly19.fasta'
		elif genome == 'mm9':
		filename='/seq/references/Mus_musculus_assembly9.fasta'
		@@ -29,8 +31,6 @@ elif genome == 'mm10':
		filename='/seq/references/Mus_musculus_assembly10.fasta'
		elif genome == 'hg18':
		filename='/seq/references/Homo_sapiens_assembly18.fasta'
		elif len(sys.argv) == 4:
		filename=sys.argv[3]
		else:
		print 'Usage: %s <restriction enzyme> <genome> [location]' % (sys.argv[0])
		print '<genome> not found and [location] not defined'