Loading CPU/juicer.sh +1 −1 Changes for CPU/juicer.sh: 1 added line, 1 removed line. Original line number Diff line number Diff line Loading @@ -406,7 +406,6 @@ then echo "(-: Mem align of $name2$ext.sam done successfully" fi fi done # sort read 1 aligned file by readname sort -T $tmpdir -k1,1 $name1$ext.sam > $name1${ext}_sort.sam if [ $? -ne 0 ] Loading Loading @@ -476,6 +475,7 @@ then else rm $name${ext}_norm.txt $name${ext}.frag.txt fi done fi #MERGE SORTED AND ALIGNED FILES Loading Loading
CPU/juicer.sh +1 −1 Changes for CPU/juicer.sh: 1 added line, 1 removed line. Original line number Diff line number Diff line Loading @@ -406,7 +406,6 @@ then echo "(-: Mem align of $name2$ext.sam done successfully" fi fi done # sort read 1 aligned file by readname sort -T $tmpdir -k1,1 $name1$ext.sam > $name1${ext}_sort.sam if [ $? -ne 0 ] Loading Loading @@ -476,6 +475,7 @@ then else rm $name${ext}_norm.txt $name${ext}.frag.txt fi done fi #MERGE SORTED AND ALIGNED FILES Loading
