Loading SLURM/scripts/juicer.sh +2 −1 Changes for SLURM/scripts/juicer.sh: 2 added lines, 1 removed line. Original line number Diff line number Diff line Loading @@ -275,8 +275,9 @@ if [ ! -e "${refSeq}.bwt" ]; then fi ## Check if ligation is a unquoted regex, if so quote if [[ -n "$ligation" && $ligation =~ [\(\)\|] && ! $ligation =~ [\"\'] ]]; if [[ -n "$ligation" && $ligation =~ [\(\)\|] && ! $ligation =~ [\"\'] ]]; then export ligation="'$ligation'" fi ## Set ligation junction based on restriction enzyme if [ -z "$ligation" ]; then Loading Loading
SLURM/scripts/juicer.sh +2 −1 Changes for SLURM/scripts/juicer.sh: 2 added lines, 1 removed line. Original line number Diff line number Diff line Loading @@ -275,8 +275,9 @@ if [ ! -e "${refSeq}.bwt" ]; then fi ## Check if ligation is a unquoted regex, if so quote if [[ -n "$ligation" && $ligation =~ [\(\)\|] && ! $ligation =~ [\"\'] ]]; if [[ -n "$ligation" && $ligation =~ [\(\)\|] && ! $ligation =~ [\"\'] ]]; then export ligation="'$ligation'" fi ## Set ligation junction based on restriction enzyme if [ -z "$ligation" ]; then Loading
