changing email address (217a5e5f) · Commits · Chaos / chaos.juicer

SLURM/scripts/split_rmdups.awk

+1 −1

Changes for SLURM/scripts/split_rmdups.awk: 1 added line, 1 removed line.
Original line number	Diff line number	Diff line
		@@ -92,7 +92,7 @@ END {
		close(sscriptname);

		sscriptname = sprintf("%s/.%s_mail.slurm", debugdir, groupname);
		printf("#!/bin/bash -l\n#SBATCH -o %s/dup-mail.out\n#SBATCH -e %s/dup-mail.err\n#SBATCH -p %s\n#SBATCH -J %s_msplit0\n#SBATCH -d singleton\n#SBATCH -t 1440\n#SBATCH -c 1\n#SBATCH --ntasks=1\ndate;\necho %s %s %s %s \| mail -r Juicer@rice.edu -s \"Juicer pipeline finished successfully @ Rice\" -t %s@rice.edu;\ndate\n", debugdir, debugdir, queue, groupname, topDir, site, genomeID, genomePath, user) > sscriptname;
		printf("#!/bin/bash -l\n#SBATCH -o %s/dup-mail.out\n#SBATCH -e %s/dup-mail.err\n#SBATCH -p %s\n#SBATCH -J %s_msplit0\n#SBATCH -d singleton\n#SBATCH -t 1440\n#SBATCH -c 1\n#SBATCH --ntasks=1\ndate;\necho %s %s %s %s \| mail -r aidenlab@bcm.edu -s \"Juicer pipeline finished successfully @ Voltron\" -t %s@hi-c.io;\ndate\n", debugdir, debugdir, queue, groupname, topDir, site, genomeID, genomePath, user) > sscriptname;
		sysstring = sprintf("sbatch %s", sscriptname);
		system(sysstring);
		close(sscriptname);