Add timeout to vina download (e35e9fd3) · Commits · 钟慕尧 / deepchem

deepchem/dock/pose_generation.py

+1 −1

Original line number	Diff line number	Diff line
		@@ -68,7 +68,7 @@ class VinaPoseGenerator(PoseGenerator):
		logger.info("Vina not available. Downloading")
		# TODO(rbharath): May want to move this file to S3 so we can ensure it's
		# always available.
		wget_cmd = "wget -nv -c http://vina.scripps.edu/download/autodock_vina_1_1_2_linux_x86.tgz"
		wget_cmd = "wget -nv -c -T 15 http://vina.scripps.edu/download/autodock_vina_1_1_2_linux_x86.tgz"
		call(wget_cmd.split())
		logger.info("Downloaded Vina. Extracting")
		download_cmd = "tar xzvf autodock_vina_1_1_2_linux_x86.tgz"