Change (ddc2d126) · Commits · 钟慕尧 / deepchem

deepchem/data/init.py

+2 −2

Original line number	Diff line number	Diff line
		@@ -4,12 +4,12 @@ Gathers all datasets in one place for convenient imports
		# TODO(rbharath): Get rid of * import
		from deepchem.data.datasets import pad_features
		from deepchem.data.datasets import pad_batch
		from deepchem.data.datasets import sparsify_features
		from deepchem.data.datasets import densify_features
		from deepchem.data.datasets import Dataset
		from deepchem.data.datasets import NumpyDataset
		from deepchem.data.datasets import DiskDataset
		from deepchem.data.datasets import ImageDataset
		from deepchem.data.datasets import sparsify_features
		from deepchem.data.datasets import densify_features
		from deepchem.data.supports import *
		from deepchem.data.data_loader import DataLoader
		from deepchem.data.data_loader import CSVLoader

+10 −5

Original line number	Diff line number	Diff line
		@@ -14,12 +14,17 @@ def get_motif_scores(encoded_sequences,

		Parameters
		----------
		encoded_sequences : 4darray
		(N_sequences, N_letters, sequence_length, 1) array
		motif_names : list of strings
		encoded_sequences: np.ndarray
		A 4darray of shape `(N_sequences, N_letters, sequence_length, 1)`
		array
		motif_names: list[str]
		List of strings with motif names.
		max_scores: int, optional
		return_positions : boolean, optional
		The maximum score to allow
		return_positions: bool, optional
		TODO
		GC_fraction : float, optional
		TODO

		Returns
		-------