Removed obsolete argument (ca2ba7c2) · Commits · 钟慕尧 / deepchem

deepchem/molnet/load_function/bace_datasets.py

+2 −6

Original line number	Diff line number	Diff line
		@@ -175,9 +175,7 @@ def load_bace_classification(featurizer='ECFP',

		if split is None:
		# Initialize transformers
		transformers = [
		deepchem.trans.BalancingTransformer(transform_w=True, dataset=dataset)
		]
		transformers = [deepchem.trans.BalancingTransformer(dataset=dataset)]

		logger.info("Split is None, about to transform data")
		for transformer in transformers:
		@@ -204,9 +202,7 @@ def load_bace_classification(featurizer='ECFP',
		frac_valid=frac_valid,
		frac_test=frac_test)

		transformers = [
		deepchem.trans.BalancingTransformer(transform_w=True, dataset=train)
		]
		transformers = [deepchem.trans.BalancingTransformer(dataset=train)]

		logger.info("About to transform data.")
		for transformer in transformers:

+2 −6

Original line number	Diff line number	Diff line
		@@ -63,9 +63,7 @@ def load_bbbp(featurizer='ECFP',

		if split is None:
		# Initialize transformers
		transformers = [
		deepchem.trans.BalancingTransformer(transform_w=True, dataset=dataset)
		]
		transformers = [deepchem.trans.BalancingTransformer(dataset=dataset)]

		logger.info("Split is None, about to transform data")
		for transformer in transformers:
		@@ -91,9 +89,7 @@ def load_bbbp(featurizer='ECFP',
		frac_test=frac_test)

		# Initialize transformers
		transformers = [
		deepchem.trans.BalancingTransformer(transform_w=True, dataset=train)
		]
		transformers = [deepchem.trans.BalancingTransformer(dataset=train)]

		for transformer in transformers:
		train = transformer.transform(train)

+8 −12

Original line number	Diff line number	Diff line
		@@ -97,9 +97,7 @@ def load_clintox(featurizer='ECFP',

		# Transform clintox dataset
		if split is None:
		transformers = [
		deepchem.trans.BalancingTransformer(transform_w=True, dataset=dataset)
		]
		transformers = [deepchem.trans.BalancingTransformer(dataset=dataset)]

		logger.info("Split is None, about to transform data.")
		for transformer in transformers:
		@@ -117,9 +115,7 @@ def load_clintox(featurizer='ECFP',
		logger.info("About to split data with {} splitter.".format(split))
		train, valid, test = splitter.train_valid_test_split(dataset)

		transformers = [
		deepchem.trans.BalancingTransformer(transform_w=True, dataset=train)
		]
		transformers = [deepchem.trans.BalancingTransformer(dataset=train)]

		logger.info("About to transform data.")
		for transformer in transformers:

+2 −6

Original line number	Diff line number	Diff line
		@@ -82,9 +82,7 @@ def load_hiv(featurizer='ECFP',
		dataset = loader.featurize(dataset_file, shard_size=8192)

		if split is None:
		transformers = [
		deepchem.trans.BalancingTransformer(transform_w=True, dataset=dataset)
		]
		transformers = [deepchem.trans.BalancingTransformer(dataset=dataset)]

		logger.info("Split is None, about to transform data")
		for transformer in transformers:
		@@ -112,9 +110,7 @@ def load_hiv(featurizer='ECFP',
		frac_test=frac_test)
		train, valid, test = splitter.train_valid_test_split(dataset)

		transformers = [
		deepchem.trans.BalancingTransformer(transform_w=True, dataset=train)
		]
		transformers = [deepchem.trans.BalancingTransformer(dataset=train)]

		logger.info("About to transform data.")
		for transformer in transformers:

+1 −3

Original line number	Diff line number	Diff line
		@@ -71,9 +71,7 @@ def load_muv(featurizer='ECFP',
		dataset = loader.featurize(dataset_file)

		if split == None:
		transformers = [
		deepchem.trans.BalancingTransformer(transform_w=True, dataset=dataset)
		]
		transformers = [deepchem.trans.BalancingTransformer(dataset=dataset)]

		logger.info("Split is None, about to transform data")
		for transformer in transformers: