Commit c3630e62 authored by nd-02110114's avatar nd-02110114
Browse files

🔥 remove deepchem.utils.log

parent d7a99002
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@@ -2,7 +2,6 @@ import logging
import numpy as np
import tensorflow as tf

from deepchem.utils.save import log
from deepchem.models import KerasModel, layers
from deepchem.models.losses import SigmoidCrossEntropy
from deepchem.trans import undo_transforms
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@@ -11,7 +11,6 @@ import collections
import deepchem as dc
from deepchem.models import KerasModel
from deepchem.models.layers import SwitchedDropout
from deepchem.utils.save import log
from deepchem.metrics import to_one_hot
from tensorflow.keras.layers import Input, Dense, Reshape, Softmax, Dropout, Activation, Lambda

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@@ -16,7 +16,6 @@ import deepchem as dc
import logging
from deepchem.data import DiskDataset
from deepchem.utils import ScaffoldGenerator
from deepchem.utils.save import log
from deepchem.data import NumpyDataset
from deepchem.utils.save import load_data

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@@ -8,7 +8,6 @@ __license__ = "MIT"
import tempfile
import numpy as np
from deepchem.utils import ScaffoldGenerator
from deepchem.utils.save import log
from deepchem.data import NumpyDataset
from deepchem.utils.save import load_data
from deepchem.splits import Splitter
+4 −3
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@@ -2,11 +2,11 @@
Utility functions to evaluate models on datasets.
"""
import csv
import logging
import numpy as np
import warnings
import pandas as pd
import sklearn
from deepchem.utils.save import log
from deepchem.trans import undo_transforms
from deepchem.metrics import from_one_hot

@@ -14,6 +14,7 @@ __author__ = "Bharath Ramsundar"
__copyright__ = "Copyright 2016, Stanford University"
__license__ = "MIT"

logger = logging.getLogger(__name__)

def relative_difference(x, y):
  """Compute the relative difference between x and y"""
@@ -102,7 +103,7 @@ class Evaluator(object):
    all_task_scores = {}

    if csv_out is not None:
      log("Saving predictions to %s" % csv_out, self.verbose)
      logger.info("Saving predictions to %s" % csv_out, self.verbose)
      self.output_predictions(y_pred_print, csv_out)

    # Compute multitask metrics
@@ -116,7 +117,7 @@ class Evaluator(object):
            y, y_pred, w, per_task_metrics=False)

    if stats_out is not None:
      log("Saving stats to %s" % stats_out, self.verbose)
      logger.info("Saving stats to %s" % stats_out, self.verbose)
      self.output_statistics(multitask_scores, stats_out)

    if not per_task_metrics:
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