Commit b97e1f72 authored by Michelle Gill's avatar Michelle Gill
Browse files

Fix yapf identified formatting issues

parent 62b136ce
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+4 −2
Original line number Diff line number Diff line
@@ -1149,11 +1149,13 @@ class MPNNTensorGraph(TensorGraph):

import warnings


class GraphConvTensorGraph(GraphConvModel):

  warnings.warn("GraphConvTensorGraph is deprecated and has been renamed to GraphConvModel and will be removed in DeepChem 3.0.", FutureWarning)
  warnings.warn(
      "GraphConvTensorGraph is deprecated and has been renamed to GraphConvModel and will be removed in DeepChem 3.0.",
      FutureWarning)

  def __init__(self, *args, **kwargs):

    super(GraphConvTensorGraph, self).__init__(*args, **kwargs)
+3 −6
Original line number Diff line number Diff line
@@ -58,8 +58,7 @@ class TestGraphModels(unittest.TestCase):
        'regression', 'GraphConv')

    batch_size = 50
    model = GraphConvModel(
        len(tasks), batch_size=batch_size, mode='regression')
    model = GraphConvModel(len(tasks), batch_size=batch_size, mode='regression')

    model.fit(dataset, nb_epoch=1)
    scores = model.evaluate(dataset, [metric], transformers)
@@ -73,8 +72,7 @@ class TestGraphModels(unittest.TestCase):
        'regression', 'GraphConv', num_tasks=1)

    batch_size = 50
    model = GraphConvModel(
        len(tasks), batch_size=batch_size, mode='regression')
    model = GraphConvModel(len(tasks), batch_size=batch_size, mode='regression')

    model.fit(dataset, nb_epoch=1)

@@ -121,8 +119,7 @@ class TestGraphModels(unittest.TestCase):
        'regression', 'GraphConv', num_tasks=1)

    batch_size = 50
    model = GraphConvModel(
        len(tasks), batch_size=batch_size, mode='regression')
    model = GraphConvModel(len(tasks), batch_size=batch_size, mode='regression')

    model.fit(dataset, nb_epoch=1)
    model.save()
+1 −2
Original line number Diff line number Diff line
@@ -74,8 +74,7 @@ def experiment(dataset_file, method='GraphConv', split='scaffold'):

  model = None
  if method == 'GraphConv':
    model = GraphConvModel(
        len(tasks), batch_size=BATCH_SIZE, mode="regression")
    model = GraphConvModel(len(tasks), batch_size=BATCH_SIZE, mode="regression")
  elif method == 'RF':

    def model_builder_rf(model_dir):