Commit b8c67a3d authored by Bharath Ramsundar's avatar Bharath Ramsundar
Browse files

Some local docs changes

parent 7220ecd5
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deep_chem
deepchem
=============

Deep Learning Toolchain for Cheminformatics and Protein Analysis
@@ -9,12 +9,12 @@ Requirements
* [sklearn](https://github.com/scikit-learn/scikit-learn.git)
* [numpy](https://store.continuum.io/cshop/anaconda/)
* [keras](keras.io)
* [vs_utils] (https://github.com/pandegroup/vs-utils.git)
* [vs-utils] (https://github.com/pandegroup/vs-utils.git)

Linux (64-bit) Installation 
------------------

Deep_chem currently requires Python 2.7
```deepchem``` currently requires Python 2.7

###Anaconda 2.7
Download the **64-bit Python 2.7** version of Anaconda for linux [here](https://www.continuum.io/downloads#_unix).
@@ -57,13 +57,13 @@ Cd into the vs-utils directory and execute
python setup.py develop
```

###deep_chem
###deepchem
Clone the deep_chem git repository
```bash
git clone https://github.com/pandegroup/deep-learning.git
git clone https://github.com/pandegroup/deepchem.git
```

Cd into the deep-learning directory and execute 
Cd into the deepchem directory and execute 
```bash
python setup.py develop
```
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@@ -122,7 +122,7 @@ todo_include_todos = False

# The theme to use for HTML and HTML Help pages.  See the documentation for
# a list of builtin themes.
html_theme = 'bizstyle'
html_theme = 'sphinx_rtd_theme'

# Theme options are theme-specific and customize the look and feel of a theme
# further.  For a list of options available for each theme, see the
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deepchem package
================
.. _modules:

Modules
=======


Subpackages
-----------
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@@ -17,7 +17,20 @@ and we welcome contributions. The development all takes place on `Github
<https://github.com/pandegroup/deepchem>`_.  deepchem is licensed under
the GNU LGPL (v2.1 or later)

New users should check out:

- :ref:`installation`
- :ref:`featurization`

For API docs, see here:

- :ref:`modules`


.. toctree::
   :maxdepth: 2
   :hidden:

   installation
   featurization
   deepchem