test fixes (979ba0d5) · Commits · 钟慕尧 / deepchem

deepchem/datasets/init.py

+1 −1

Original line number	Diff line number	Diff line
		@@ -48,7 +48,7 @@ class Dataset(object):
		metadata_rows = []
		ids, X, y, w = raw_data
		metadata_rows.append(
		Dataset.write_data_to_disk(self.data_dir, "data", X, y, w, ids))
		Dataset.write_data_to_disk(self.data_dir, "data",tasks, X, y, w, ids))
		self.metadata_df = Dataset.construct_metadata(metadata_rows)
		self.save_to_disk()
		else:

deepchem/transformers/tests/test_transformers.py

+6 −6

Original line number	Diff line number	Diff line
		@@ -23,7 +23,7 @@ class TestTransformerAPI(TestDatasetAPI):

		def test_y_log_transformer(self):
		"""Tests logarithmic data transformer."""
		solubility_dataset = self._load_solubility_data()
		solubility_dataset = self.load_solubility_data()
		log_transformer = LogTransformer(
		transform_y=True, dataset=solubility_dataset)
		X, y, w, ids = solubility_dataset.to_numpy()
		@@ -45,7 +45,7 @@ class TestTransformerAPI(TestDatasetAPI):

		def test_X_log_transformer(self):
		"""Tests logarithmic data transformer."""
		solubility_dataset = self._load_solubility_data()
		solubility_dataset = self.load_solubility_data()
		log_transformer = LogTransformer(
		transform_X=True, dataset=solubility_dataset)
		X, y, w, ids = solubility_dataset.to_numpy()
		@@ -67,7 +67,7 @@ class TestTransformerAPI(TestDatasetAPI):

		def test_y_normalization_transformer(self):
		"""Tests normalization transformer."""
		solubility_dataset = self._load_solubility_data()
		solubility_dataset = self.load_solubility_data()
		normalization_transformer = NormalizationTransformer(
		transform_y=True, dataset=solubility_dataset)
		X, y, w, ids = solubility_dataset.to_numpy()
		@@ -89,7 +89,7 @@ class TestTransformerAPI(TestDatasetAPI):

		def test_X_normalization_transformer(self):
		"""Tests normalization transformer."""
		solubility_dataset = self._load_solubility_data()
		solubility_dataset = self.load_solubility_data()
		normalization_transformer = NormalizationTransformer(
		transform_X=True, dataset=solubility_dataset)
		X, y, w, ids = solubility_dataset.to_numpy()
		@@ -121,7 +121,7 @@ class TestTransformerAPI(TestDatasetAPI):
		def test_singletask_balancing_transformer(self):
		"""Test balancing transformer on single-task dataset."""

		classification_dataset = self._load_classification_data()
		classification_dataset = self.load_classification_data()
		balancing_transformer = BalancingTransformer(
		transform_w=True, dataset=classification_dataset)
		X, y, w, ids = classification_dataset.to_numpy()
		@@ -147,7 +147,7 @@ class TestTransformerAPI(TestDatasetAPI):

		def test_multitask_balancing_transformer(self):
		"""Test balancing transformer on multitask dataset."""
		multitask_dataset = self._load_multitask_data()
		multitask_dataset = self.load_multitask_data()
		balancing_transformer = BalancingTransformer(
		transform_w=True, dataset=multitask_dataset)
		X, y, w, ids = multitask_dataset.to_numpy()

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