little changes (89bb5ba0) · Commits · 钟慕尧 / deepchem

examples/sider/sider_datasets.py

+0 −13

Original line number	Diff line number	Diff line
		@@ -10,7 +10,6 @@ import numpy as np
		import shutil
		import deepchem as dc

		<<<<<<< HEAD
		def load_sider(method = 'ECFP'):
		current_dir = os.path.dirname(os.path.realpath(__file__))

		@@ -29,18 +28,6 @@ def load_sider(method = 'ECFP'):
		elif method == 'GraphConv':
		featurizer = dc.feat.ConvMolFeaturizer()

		=======
		def load_sider():
		"""Load SIDER datasets. Does not do train/test split"""
		# Featurize SIDER dataset
		print("About to featurize SIDER dataset.")
		current_dir = os.path.dirname(os.path.realpath(__file__))
		dataset_file = os.path.join(
		current_dir, "./sider.csv.gz")
		featurizer = dc.feat.CircularFingerprint(size=1024)

		dataset = dc.utils.save.load_from_disk(dataset_file)
		>>>>>>> da5be2a805bfba096fe3f029c23c2ca675a195a5
		SIDER_tasks = dataset.columns.values[1:].tolist()
		print("SIDER tasks: %s" % str(SIDER_tasks))
		print("%d tasks in total" % len(SIDER_tasks))