Commit 875e0590 authored by Bharath Ramsundar's avatar Bharath Ramsundar Committed by GitHub
Browse files

Merge pull request #447 from miaecle/molnet

dc.molnet module
parents d77ccf9b 1556fe10
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@@ -15,3 +15,4 @@ import deepchem.splits
import deepchem.trans
import deepchem.utils
import deepchem.dock
import deepchem.molnet
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@@ -22,3 +22,4 @@ from deepchem.feat.rdkit_grid_featurizer import RdkitGridFeaturizer
from deepchem.feat.nnscore_utils import hydrogenate_and_compute_partial_charges
from deepchem.feat.binding_pocket_features import BindingPocketFeaturizer
from deepchem.feat.one_hot import OneHotFeaturizer
from deepchem.feat.raw_featurizer import RawFeaturizer
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#!/usr/bin/env python2
# -*- coding: utf-8 -*-
from __future__ import print_function
from __future__ import division
from __future__ import unicode_literals

from rdkit import Chem
from deepchem.feat import Featurizer


class RawFeaturizer(Featurizer):

  def __init__(self, smiles=False):
    self.smiles = smiles

  def _featurize(self, mol):
    if self.smiles:
      return Chem.MolToSmiles(mol)
    else:
      return mol
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from deepchem.molnet.load_function.chembl_datasets import load_chembl
from deepchem.molnet.load_function.clintox_datasets import load_clintox
from deepchem.molnet.load_function.delaney_datasets import load_delaney
from deepchem.molnet.load_function.hiv_datasets import load_hiv
from deepchem.molnet.load_function.kaggle_datasets import load_kaggle
from deepchem.molnet.load_function.muv_datasets import load_muv
from deepchem.molnet.load_function.nci_datasets import load_nci
from deepchem.molnet.load_function.pcba_datasets import load_pcba
from deepchem.molnet.load_function.pdbbind_datasets import load_pdbbind_grid
from deepchem.molnet.load_function.qm7_datasets import load_qm7_from_mat, load_qm7b_from_mat
from deepchem.molnet.load_function.qm9_datasets import load_qm9
from deepchem.molnet.load_function.sampl_datasets import load_sampl
from deepchem.molnet.load_function.sider_datasets import load_sider
from deepchem.molnet.load_function.tox21_datasets import load_tox21
from deepchem.molnet.load_function.toxcast_datasets import load_toxcast

from deepchem.molnet.run_benchmark import run_benchmark
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