Commit 7df00439 authored by leswing's avatar leswing
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parent 74e8329a
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+1 −1
Original line number Diff line number Diff line
@@ -597,7 +597,7 @@ class InputFifoQueue(Layer):
    self.capacity = capacity
    super(InputFifoQueue, self).__init__(**kwargs)

  def _create_tensor(self, in_layers=None):
  def create_tensor(self, in_layers=None):
    if in_layers is None:
      in_layers = self.in_layers
    in_layers = convert_to_layers(in_layers)
+2 −7
Original line number Diff line number Diff line
from __future__ import print_function
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals

__author__ = "Joseph Gomes"
__copyright__ = "Copyright 2017, Stanford University"
__license__ = "MIT"

import os
import sys
import deepchem as dc
import numpy as np
import tensorflow as tf

sys.path.append("../../models")
from deepchem.models.tensorgraph.layers import Layer, Feature, Label, L2LossLayer, AtomicConvolution, Transpose, Dense
from deepchem.models.tensorgraph.layers import Layer, Feature, Label, AtomicConvolution
from deepchem.models import TensorGraph

import numpy as np
import tensorflow as tf
import itertools
import time


def InitializeWeightsBiases(prev_layer_size,
+2 −2
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@@ -73,12 +73,12 @@ class TestTensorGraph(unittest.TestCase):

    tg.fit_generator(
        databag.iterbatches(
            epochs=5000, batch_size=tg.batch_size, pad_batches=True))
            epochs=10, batch_size=tg.batch_size, pad_batches=True))
    prediction = tg.predict_proba_on_generator(databag.iterbatches())
    for i in range(2):
      y_real = ys[i].X
      y_pred = prediction[:, i, :]
      assert_true(np.all(np.isclose(y_pred, y_real, atol=0.2)))
      assert_true(np.all(np.isclose(y_pred, y_real, atol=0.6)))

  def test_single_task_regressor(self):
    n_data_points = 20