Unverified Commit 3b892827 authored by Bharath Ramsundar's avatar Bharath Ramsundar Committed by GitHub
Browse files

Merge pull request #2462 from mufeili/fix_molnet 

Use Log Transform for Clearance and HPPB
parents 374cec58 2ff85193

deepchem/molnet/load_function/clearance_datasets.py

+1 −1
Original line number Diff line number Diff line
@@ -26,7 +26,7 @@ class _ClearanceLoader(_MolnetLoader): 
def load_clearance(

    featurizer: Union[dc.feat.Featurizer, str] = 'ECFP',

    splitter: Union[dc.splits.Splitter, str, None] = 'scaffold',

    transformers: List[Union[TransformerGenerator, str]] = ['normalization'],

    transformers: List[Union[TransformerGenerator, str]] = ['log'],

    reload: bool = True,

    data_dir: Optional[str] = None,

    save_dir: Optional[str] = None,

deepchem/molnet/load_function/hppb_datasets.py

+1 −1
Original line number Diff line number Diff line
@@ -42,7 +42,7 @@ class _HPPBLoader(_MolnetLoader): 
def load_hppb(

    featurizer: Union[dc.feat.Featurizer, str] = 'ECFP',

    splitter: Union[dc.splits.Splitter, str, None] = 'scaffold',

    transformers: List[Union[TransformerGenerator, str]] = [],

    transformers: List[Union[TransformerGenerator, str]] = ['log'],

    reload: bool = True,

    data_dir: Optional[str] = None,

    save_dir: Optional[str] = None,

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