Commit 203ac99d authored by Bharath Ramsundar's avatar Bharath Ramsundar
Browse files

Changing imports in files

parent 45060f77
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+0 −1
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@@ -13,7 +13,6 @@ import deepchem.hyper
import deepchem.metalearning
import deepchem.metrics
import deepchem.models
import deepchem.nn
import deepchem.splits
import deepchem.trans
import deepchem.utils
+1 −1
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@@ -12,7 +12,7 @@ import threading
import collections

import deepchem as dc
from deepchem.nn import model_ops
from deepchem.models.tensorgraph import model_ops
from deepchem.utils.save import log
from deepchem.metrics import to_one_hot, from_one_hot
from deepchem.metrics import to_one_hot
+3 −4
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@@ -12,10 +12,9 @@ from __future__ import unicode_literals

import numpy as np
import tensorflow as tf
from deepchem.nn import activations
from deepchem.nn import initializations
from deepchem.nn import model_ops

from deepchem.models.tensorgraph import activations
from deepchem.models.tensorgraph import initializations
from deepchem.models.tensorgraph import model_ops
from deepchem.models.tensorgraph.layers import Layer, LayerSplitter
from deepchem.models.tensorgraph.layers import convert_to_layers

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@@ -5,7 +5,6 @@ repository. The SequenceDNN class is useful for prediction
tasks working with genomic data.
"""
import tensorflow as tf
from deepchem.nn.regularizers import l1
from deepchem.models import Sequential
from deepchem.models.tensorgraph import layers
from deepchem.data import NumpyDataset
+5 −6
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@@ -11,10 +11,9 @@ from __future__ import unicode_literals

import numpy as np
import tensorflow as tf
from deepchem.nn import activations
from deepchem.nn import initializations
from deepchem.nn import model_ops

from deepchem.models.tensorgraph import activations
from deepchem.models.tensorgraph import initializations
from deepchem.models.tensorgraph import model_ops
from deepchem.models.tensorgraph.layers import Layer
from deepchem.models.tensorgraph.layers import convert_to_layers
from deepchem.metrics import to_one_hot
@@ -445,8 +444,8 @@ class AtomicDifferentiatedDense(Layer):
          self.b[i, :])

      mask = 1 - tf.to_float(tf.cast(atom_numbers - atom_case, tf.bool))
      output = tf.reshape(output * tf.expand_dims(mask, 2), (-1, self.max_atoms,
                                                             self.out_channels))
      output = tf.reshape(output * tf.expand_dims(mask, 2),
                          (-1, self.max_atoms, self.out_channels))
      outputs.append(output)
    self.out_tensor = tf.add_n(outputs)