Unverified Commit 0e21722f authored by Bharath Ramsundar's avatar Bharath Ramsundar Committed by GitHub
Browse files

Merge pull request #1183 from nitinprakash96/load-functions 

Cast None to string
parents bd74c877 0199fb9e

deepchem/molnet/load_function/bace_datasets.py

+2 −2
Original line number Diff line number Diff line
@@ -18,7 +18,7 @@ def load_bace_regression(featurizer='ECFP', split='random', reload=True): 
  logger.info("About to featurize bace dataset.")

  data_dir = deepchem.utils.get_data_dir()

  if reload:

    save_dir = os.path.join(data_dir, "bace_r/" + featurizer + "/" + split)

    save_dir = os.path.join(data_dir, "bace_r/" + featurizer + "/" + str(split))



  dataset_file = os.path.join(data_dir, "bace.csv")
@@ -83,7 +83,7 @@ def load_bace_classification(featurizer='ECFP', split='random', reload=True): 
  logger.info("About to featurize bace dataset.")

  data_dir = deepchem.utils.get_data_dir()

  if reload:

    save_dir = os.path.join(data_dir, "bace_c/" + featurizer + "/" + split)

    save_dir = os.path.join(data_dir, "bace_c/" + featurizer + "/" + str(split))



  dataset_file = os.path.join(data_dir, "bace.csv")

deepchem/molnet/load_function/bbbp_datasets.py

+1 −1
Original line number Diff line number Diff line
@@ -17,7 +17,7 @@ def load_bbbp(featurizer='ECFP', split='random', reload=True): 
  logger.info("About to featurize bbbp dataset.")

  data_dir = deepchem.utils.get_data_dir()

  if reload:

    save_dir = os.path.join(data_dir, "bbbp/" + featurizer + "/" + split)

    save_dir = os.path.join(data_dir, "bbbp/" + featurizer + "/" + str(split))



  dataset_file = os.path.join(data_dir, "BBBP.csv")

  if not os.path.exists(dataset_file):

deepchem/molnet/load_function/chembl_datasets.py

+1 −1
Original line number Diff line number Diff line
@@ -20,7 +20,7 @@ def load_chembl(shard_size=2000, 


  data_dir = deepchem.utils.get_data_dir()

  if reload:

    save_dir = os.path.join(data_dir, "chembl/" + featurizer + "/" + split)

    save_dir = os.path.join(data_dir, "chembl/" + featurizer + "/" + str(split))



  dataset_path = os.path.join(data_dir, "chembl_%s.csv.gz" % set)

  if not os.path.exists(dataset_path):

deepchem/molnet/load_function/clearance_datasets.py

+2 −1
Original line number Diff line number Diff line
@@ -18,7 +18,8 @@ def load_clearance(featurizer='ECFP', split='random', reload=True): 
  logger.info("About to load clearance dataset.")

  data_dir = deepchem.utils.get_data_dir()

  if reload:

    save_dir = os.path.join(data_dir, "clearance/" + featurizer + "/" + split)

    save_dir = os.path.join(data_dir,

                            "clearance/" + featurizer + "/" + str(split))



  dataset_file = os.path.join(data_dir, "clearance.csv")

  if not os.path.exists(dataset_file):

deepchem/molnet/load_function/clintox_datasets.py

+2 −1
Original line number Diff line number Diff line
@@ -18,7 +18,8 @@ def load_clintox(featurizer='ECFP', split='index', reload=True): 


  data_dir = deepchem.utils.get_data_dir()

  if reload:

    save_dir = os.path.join(data_dir, "clintox/" + featurizer + "/" + split)

    save_dir = os.path.join(data_dir,

                            "clintox/" + featurizer + "/" + str(split))



  dataset_file = os.path.join(data_dir, "clintox.csv.gz")

  if not os.path.exists(dataset_file):

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