Commit ff09c191 authored by Eugen Rožić's avatar Eugen Rožić
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documentation for fix_wall_region morse

parent 915e0b30
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+22 −10
Original line number Diff line number Diff line
@@ -10,19 +10,23 @@ fix wall/region command :h3

[Syntax:]

fix ID group-ID wall/region region-ID style epsilon sigma cutoff :pre

ID, group-ID are documented in "fix"_fix.html command
wall/region = style name of this fix command
region-ID = region whose boundary will act as wall
style = {lj93} or {lj126} or {lj1043} or {colloid} or {harmonic}
epsilon = strength factor for wall-particle interaction (energy or energy/distance^2 units)
sigma = size factor for wall-particle interaction (distance units)
cutoff = distance from wall at which wall-particle interaction is cut off (distance units) :ul
fix ID group-ID wall/region region-ID style epsilon sigma cutoff args ... :pre

ID, group-ID are documented in "fix"_fix.html command :ulb,l
wall/region = style name of this fix command :l
region-ID = region whose boundary will act as wall :l
style = {lj93} or {lj126} or {lj1043} or {morse} or {colloid} or {harmonic} :l
epsilon = strength factor for wall-particle interaction (energy or energy/distance^2 units) :l
sigma = size factor for wall-particle interaction (distance units) :l
cutoff = distance from wall at which wall-particle interaction is cut off (distance units) :l
args = :l
  alpha (width parameter), if style = {morse}
  {none}, if style = {lj93/lj126/lj1043/colloid/harmonic} :pre

[Examples:]

fix wall all wall/region mySphere lj93 1.0 1.0 2.5 :pre
fix wall all wall/region mySphere lj93 1.0 1.0 2.5
fix wall all wall/region box_top morse 1.0 1.0 3.0 1.5 :pre

[Description:]

@@ -116,6 +120,12 @@ For style {wall/lj1043}, the energy E is given by the 10/4/3 potential:

:c,image(Eqs/fix_wall_lj1043.jpg)

for style {wall/morse}, the energy E is given by the Morse potential:

:c,image(Eqs/pair_morse.jpg)

where {r_0 = sigma} and {D_0 = epsilon}.

For style {colloid}, the energy E is given by an integrated form of
the "pair_style colloid"_pair_colloid.html potential:

@@ -179,7 +189,9 @@ option for this fix.

"fix wall/lj93"_fix_wall.html,
"fix wall/lj126"_fix_wall.html,
"fix wall/lj1043"_fix_wall.html,
"fix wall/colloid"_fix_wall.html,
"fix wall/harmonic"_fix_wall.html,
"fix wall/gran"_fix_wall_gran.html

[Default:] none