Update kim_query & clear and update examples/kim

variable	yy equal 20*$y

variable	zz equal 20*$z

kim_init        Sim_LAMMPS_LJcut_AkersonElliott_Alchemy_PbAu real unit_conversion_mode

newton          on

kim_init	LennardJones_Ar real

lattice		fcc 4.4300

region		box block 0 ${xx} 0 ${yy} 0 ${zz}

create_box	1 box

create_atoms	1 box

kim_interactions	Au

kim_interactions Ar

mass		1 39.95

velocity	all create 200.0 232345 loop geom

neigh_modify	delay 0 every 1 check yes

fix		1 all nve

#fix		1 all npt temp 1.0 1.0 1.0 iso 1.0 1.0 3.0

run 		100

# 3d Lennard-Jones melt

#

# This example requires that the KIM Portable Model (PM)

# SW_StillingerWeber_1985_Si__MO_405512056662_005

# is installed.  This can be done with the command

#   kim-api-collections-management install user SW_StillingerWeber_1985_Si__MO_405512056662_005

# Or, see https://openkim.org/doc/obtaining-models for alternative options.

#

variable	x index 1

variable	y index 1

variable	yy equal 20*$y

variable	zz equal 20*$z

units		metal

atom_style	atomic

newton          off

kim_init	SW_StillingerWeber_1985_Si__MO_405512056662_005 real

kim_query       a0 get_lattice_constant_cubic crystal=["fcc"] species=["Si"] units=["angstrom"]

lattice		fcc 4.4300

lattice		fcc ${a0}

region		box block 0 ${xx} 0 ${yy} 0 ${zz}

create_box	1 box

create_atoms	1 box

pair_style	lj/cut 8.1500

pair_coeff	1 1 0.0104 3.4000

#pair_style      kim LennardJones_Ar

#pair_coeff      * * Ar

kim_interactions Si

mass		1 39.95

velocity	all create 200.0 232345 loop geom

# 3d Lennard-Jones melt

#

# This example requires that the example models provided with

# the kim-api package are installed.  see the ./lib/kim/README or

# ./lib/kim/Install.py files for details on how to install these

# example models.

# This example requires that the KIM Portable Model (PM)

# SW_StillingerWeber_1985_Si__MO_405512056662_005

# is installed.  This can be done with the command

#   kim-api-collections-management install user SW_StillingerWeber_1985_Si__MO_405512056662_005

# Or, see https://openkim.org/doc/obtaining-models for alternative options.

#

variable	x index 1

variable	yy equal 20*$y

variable	zz equal 20*$z

units		metal

atom_style	atomic

newton          off

kim_init	SW_StillingerWeber_1985_Si__MO_405512056662_005 real

lattice		fcc 4.4300

region		box block 0 ${xx} 0 ${yy} 0 ${zz}

create_box	1 box

create_atoms	1 box

#pair_style	lj/cut 8.1500

#pair_coeff	1 1 0.0104 3.4000

pair_style      kim LennardJones_Ar

pair_coeff      * * Ar

kim_interactions Si

mass		1 39.95

velocity	all create 200.0 232345 loop geom

# 3d Lennard-Jones melt

#

# This example requires that the example models provided with

# the kim-api package are installed.  see the ./lib/kim/README or

# ./lib/kim/Install.py files for details on how to install these

# example models.

# This example requires that the KIM Simulator Model (PM)

# Sim_LAMMPS_ReaxFF_StrachanVanDuinChakraborty_2003_CHNO__SM_107643900657_000

# is installed.  This can be done with the command

#   kim-api-collections-management install user Sim_LAMMPS_ReaxFF_StrachanVanDuinChakraborty_2003_CHNO__SM_107643900657_000

# Or, see https://openkim.org/doc/obtaining-models for alternative options.

#

variable	x index 1

variable	yy equal 20*$y

variable	zz equal 20*$z

units		metal

atom_style	atomic

newton          on

kim_init	Sim_LAMMPS_ReaxFF_StrachanVanDuinChakraborty_2003_CHNO__SM_107643900657_000 real

lattice		fcc 4.4300

region		box block 0 ${xx} 0 ${yy} 0 ${zz}

create_box	1 box

create_atoms	1 box

#pair_style	lj/cut 8.1500

#pair_coeff	1 1 0.0104 3.4000

pair_style      kim LennardJones_Ar

pair_coeff      * * Ar

kim_interactions O

mass		1 39.95

velocity	all create 200.0 232345 loop geom

variable	yy equal 20*$y

variable	zz equal 20*$z

units		metal

atom_style	atomic

newton          on

units		real

lattice		fcc 4.4300

region		box block 0 ${xx} 0 ${yy} 0 ${zz}