Unverified Commit dff78c19 authored by Axel Kohlmeyer's avatar Axel Kohlmeyer
Browse files

add tests for pair styles adp, atm, sw and tersoff and new data/input

parent 5e3fe197
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+10 −1
Original line number Diff line number Diff line
@@ -22,7 +22,7 @@ foreach(TEST ${MOL_PAIR_TESTS})
    WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR})
endforeach()

# tests for atomic systems and related pair styles
# tests for metal-like atomic systems and related pair styles
file(GLOB ATOMIC_PAIR_TESTS LIST_DIRECTORIES false ${TEST_INPUT_FOLDER}/atomic-pair-*.yaml)
foreach(TEST ${ATOMIC_PAIR_TESTS})
  string(REGEX REPLACE "^.*atomic-pair-(.*)\.yaml" "AtomicPairStyle:\\1" TNAME ${TEST})
@@ -31,6 +31,15 @@ foreach(TEST ${ATOMIC_PAIR_TESTS})
  set_tests_properties(${TNAME} PROPERTIES ENVIRONMENT "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS_DIR}")
endforeach()

# tests for Si-like manybody systems and related pair styles
file(GLOB MANYBODY_PAIR_TESTS LIST_DIRECTORIES false ${TEST_INPUT_FOLDER}/manybody-pair-*.yaml)
foreach(TEST ${MANYBODY_PAIR_TESTS})
  string(REGEX REPLACE "^.*manybody-pair-(.*)\.yaml" "ManybodyPairStyle:\\1" TNAME ${TEST})
  add_test(NAME ${TNAME} COMMAND pair_style ${TEST}
    WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR})
  set_tests_properties(${TNAME} PROPERTIES ENVIRONMENT "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS_DIR}")
endforeach()

# bond style tester
add_executable(bond_style bond_style.cpp)
target_link_libraries(bond_style PRIVATE lammps style_tests)
+89 −0
Original line number Diff line number Diff line
---
lammps_version: 5 May 2020
date_generated: Tue May 26 18:05:10 202
epsilon: 1e-13
prerequisites: ! |
  pair adp
pre_commands: ! ""
post_commands: ! ""
input_file: in.metal
pair_style: adp
pair_coeff: ! |
  * * AlCu.adp Al Cu
extract: ! ""
natoms: 32
init_vdwl: -96.3621905354495
init_coul: 0
init_stress: ! |2-
   1.0950940963019309e+02  9.8793143617200286e+01  8.2868514028589203e+01  4.4674243524583641e+00 -1.6359979177752422e+00  3.1824061950082316e+00
init_forces: ! |2
    1  2.6418556012240524e+00  3.0791110120727834e+00 -4.3456214378906044e-01
    2 -1.2141845894013787e+00 -1.6357864402684945e+00  9.8797759298830901e-01
    3 -2.5754585792526252e-01  1.9004324101935111e+00 -5.7788457649458524e-01
    4  1.2215481704788278e-01 -4.8576918398407010e-01 -1.9299014100870855e+00
    5 -8.1727258278999071e-01  4.5832448973069297e+00  1.2611240957594481e+00
    6  1.4635484515168800e+00  3.3535268222650072e+00  1.2576763798236709e-01
    7 -1.4488054805439372e+00  2.9651178960391880e+00  6.4858435580248630e-01
    8 -1.3770073607813824e+00 -1.5703153898762934e+00  3.3102239898170727e-01
    9 -1.3697614207094917e+00 -2.2764220743553989e+00 -2.0310472165159137e+00
   10 -4.9802855878506413e-01 -7.6763046573537241e-01 -2.9361965034325213e+00
   11 -1.4230052677849754e+00 -5.0334859786147721e+00  2.8633312080499653e+00
   12 -1.2106526197639287e+00 -3.0856321145554388e+00  5.1256612481593822e-01
   13  7.8581642020687426e-01  1.0242142380756333e-01 -1.0380200691043213e+00
   14  1.4047063541049598e+00  2.4026617055765678e-01  1.2109818633912310e+00
   15 -1.1690767391691688e+00  9.4066356394858985e-01 -1.5653707286463201e+00
   16  4.2254765660007410e+00 -3.4672026225176471e+00  1.6342523174158279e+00
   17  2.1343541245137030e+00  4.9430135580079071e+00  1.1900581236812249e+00
   18 -4.2337122974188954e+00 -1.3525510756568251e+00 -1.5575745101497862e+00
   19 -3.1543746354852455e+00 -2.5620907532907506e+00  3.6408570868350071e-01
   20  3.8637992201883486e-01  1.0619428905966560e-01 -8.0546718010180995e-01
   21  2.7369023483518196e+00  3.0915007072198715e+00  9.1269055562841117e-01
   22  1.6989958841939415e-01 -2.8093680327172268e+00 -8.3168495193076331e-01
   23  1.2348249856632112e+00  1.2864017252777045e+00 -2.8129726341997441e+00
   24  3.3579423586745953e+00  2.1120501164465693e+00  2.5290197681570179e+00
   25  2.6074130223214920e+00  5.3982471417457190e-01 -1.5085445988708297e+00
   26 -1.2888296180198777e+00 -2.4575650778301750e+00  3.2508326993677845e+00
   27 -5.9891527786658016e-01 -1.9133108276730251e+00 -1.6067572074939560e+00
   28  8.5820468629457602e-01  1.5139451363119676e+00  1.9835666715849922e+00
   29  5.0935904713279445e-01  3.5669579148382082e+00 -7.4244727417423911e-02
   30 -1.0514674962209756e+00  4.6022227597482734e-01 -1.6698279858900587e+00
   31 -1.4488194920959718e+00 -3.1789190528067137e+00  2.9594105842256515e+00
   32 -2.0773789987296838e+00 -2.1888455436203138e+00 -1.3852152623916831e+00
run_vdwl: -97.2840335101252
run_coul: 0
run_stress: ! |2-
   1.0925403884890126e+02  1.0018439642388212e+02  8.3068253121729811e+01  4.5993272946160433e+00 -1.7799394161194859e+00  2.9390998409508358e+00
run_forces: ! |2
    1  2.4064978281383116e+00  2.8310326936438877e+00 -3.5810016705697367e-01
    2 -1.1261310132338069e+00 -1.5312320923043055e+00  9.6952704543098811e-01
    3 -2.4650555117225181e-01  1.8315233906328920e+00 -5.7634113367450002e-01
    4  1.2242282478350608e-01 -4.3211338579366498e-01 -1.8416879128899488e+00
    5 -7.0953596594993995e-01  4.3872501528819772e+00  1.2198764107921147e+00
    6  1.4355778194846196e+00  3.1230427942640886e+00  1.0460063095047266e-01
    7 -1.3416390203108872e+00  2.8948917966566108e+00  5.2646849990322797e-01
    8 -1.4007930720394097e+00 -1.5230294132832771e+00  3.4579502678166296e-01
    9 -1.2622837538049017e+00 -2.2231298677487961e+00 -2.0045399334221412e+00
   10 -4.3913922697311669e-01 -9.0840973588166463e-01 -2.8218327626483251e+00
   11 -1.3147642860228517e+00 -4.8236401147771337e+00  2.6871309117513680e+00
   12 -1.0957379311264326e+00 -2.9278906379066498e+00  4.6929334188560934e-01
   13  6.7249226506672344e-01  1.1483409210433106e-01 -9.6784482414126272e-01
   14  1.4106438235859298e+00  3.6819359106125810e-01  1.1836433781724227e+00
   15 -1.0871174078364445e+00  8.4370127310773335e-01 -1.4801691474240857e+00
   16  3.8907862703737037e+00 -3.3139955888245916e+00  1.5672229237406345e+00
   17  2.1444955824270222e+00  4.8533155990282646e+00  1.0545502443590111e+00
   18 -4.0554294388745866e+00 -1.3079577852355624e+00 -1.5174362521234366e+00
   19 -3.0072194753444514e+00 -2.4667032104263260e+00  3.5614927986445716e-01
   20  3.5586969111907174e-01  1.4473797586761281e-01 -8.3789376744459909e-01
   21  2.6413106532436315e+00  2.9469445429824588e+00  8.5617991697448781e-01
   22  2.2100391009224801e-01 -2.6566634187479758e+00 -8.0101369565518421e-01
   23  1.1776903128486964e+00  1.3203050720866989e+00 -2.6493524059502667e+00
   24  3.1945792941270805e+00  2.0791083868152311e+00  2.4754363069038008e+00
   25  2.4537864834143148e+00  5.5354561408985292e-01 -1.4374704915688303e+00
   26 -1.2204586684158216e+00 -2.3600757011587330e+00  3.1427413394695853e+00
   27 -5.5338014379062539e-01 -1.9087190309620143e+00 -1.5736095755530599e+00
   28  7.8017213821606735e-01  1.4703377685237793e+00  1.9909979967943472e+00
   29  4.4948816191724444e-01  3.3942012039423943e+00  3.4685365598763132e-03
   30 -1.0472698350323018e+00  4.0806056721724765e-01 -1.6032550490562876e+00
   31 -1.4002064035600614e+00 -3.0959067091238390e+00  2.8187227270565738e+00
   32 -2.0492058653502760e+00 -2.0855598227317866e+00 -1.3012573987817382e+00
...
+91 −0
Original line number Diff line number Diff line
---
lammps_version: 5 May 2020
date_generated: Tue May 26 18:19:54 202
epsilon: 5e-12
prerequisites: ! |
  pair atm
pre_commands: ! |
  variable newton_pair delete
  variable newton_pair index on
post_commands: ! ""
input_file: in.metal
pair_style: atm 12.0 5.0
pair_coeff: ! |
  * * * 25.0
extract: ! ""
natoms: 32
init_vdwl: 4.29790007480121
init_coul: 0
init_stress: ! |2-
   1.2907320878711678e+01  1.2784310537300177e+01  1.2989469257199106e+01  3.2388109042463260e-02  4.8727763023580862e-03 -4.0982848248419549e-03
init_forces: ! |2
    1  3.5581409515979601e-02  6.6170603930536254e-02 -1.9657602591644043e-02
    2 -4.0181790045265731e-02 -2.0892933124588189e-02  4.3515647665365753e-02
    3 -5.2873801996566078e-02  1.9415917918634595e-01 -3.9730705882249660e-02
    4  4.3221201173691610e-02 -5.3912532143246582e-03 -3.2281153069682836e-02
    5 -1.8387318177822624e-02  8.7317610234375787e-02  2.7969018153540259e-02
    6  2.6185663882376260e-02  3.5171102644862277e-02 -5.1219375613743021e-03
    7 -3.1490819881942640e-02  6.5956101386308016e-02  6.8677867158615392e-03
    8 -1.9771689987523610e-02 -3.7594921850371769e-02 -8.4307495282797650e-03
    9  4.7919820371530121e-04 -5.9529779739449271e-02  4.5230340595518318e-03
   10 -3.8804555986763328e-02 -4.6922196051675163e-02 -1.0797129016352182e-01
   11 -3.2826076903999080e-02 -7.5503308259920576e-02  1.1970705076231533e-02
   12 -2.4613812864747092e-02 -6.7239447290304469e-02 -9.0121820237178494e-03
   13  2.7089300794964806e-03 -1.4528071587921704e-02 -2.7347662355917620e-02
   14  2.7986260739369110e-02 -6.5461527447112561e-02  7.5534446982419956e-02
   15  1.9271005231787620e-03  7.2359472904105380e-03 -3.0781693569678650e-02
   16  1.1687070682628822e-01 -6.4312104712192772e-02  2.1309553149323875e-02
   17  1.0888534531464095e-02  1.0454723570267324e-01  3.5614863964300483e-02
   18 -9.1983745551187018e-02  3.5982768868181726e-02 -6.5770192983863413e-02
   19 -9.7745812634025681e-02 -2.8662838433594975e-02  4.2884191392092347e-02
   20  6.6929579981924369e-03 -1.1324028905164241e-03  1.4621781626674010e-02
   21  9.8648813214533046e-02  3.7753727846415210e-02 -2.4132398124233179e-02
   22  7.8439198831445310e-03 -6.0335873260805896e-02  1.9437161621838246e-02
   23  4.6614292744932499e-02  1.1857041206603151e-01 -3.3964248081929875e-02
   24  7.7454114924576462e-02  5.7378617647303773e-02  5.6931300289059149e-02
   25  6.9887613104710547e-02 -4.2398102358800677e-02 -3.5028752068428398e-02
   26 -1.6224830127918644e-02 -1.1761564791910283e-01  1.0092892057253366e-01
   27  1.4972600768275168e-02  2.8960710760345877e-02  1.1372156522297028e-02
   28  8.8185313442822003e-02  2.8854403352889186e-03  4.1475457222057879e-02
   29 -1.5664166042089471e-02  4.4232213894541059e-02 -5.4316410243832438e-03
   30 -5.4737231063771909e-02 -7.4768574267284921e-04 -7.9319198647640782e-02
   31 -1.6935816002065361e-02 -1.0547543496314456e-01  5.0982604012348082e-02
   32 -1.2390716429105794e-01 -7.2578142947119742e-02 -4.1957221348949782e-02
run_vdwl: 4.29678520905175
run_coul: 0
run_stress: ! |2-
   1.2902501676629520e+01  1.2783007042632454e+01  1.2985558162203775e+01  3.1902451318206584e-02  4.9692682027741341e-03 -4.5841675964141118e-03
run_forces: ! |2
    1  3.3734691997181203e-02  6.5926666157357816e-02 -2.0212661794738487e-02
    2 -4.0243038944484999e-02 -2.0489733787140557e-02  4.3944476008022572e-02
    3 -5.2124466923619217e-02  1.9244290660437285e-01 -4.0102595899321400e-02
    4  4.3912830867371563e-02 -5.0564625615345709e-03 -3.2091995790436166e-02
    5 -1.8276949365810320e-02  8.6512717045277576e-02  2.8791766737910139e-02
    6  2.6660132934969657e-02  3.4027933791671121e-02 -6.0675731973441971e-03
    7 -3.1808400382727343e-02  6.6249693662560338e-02  5.5345909483010495e-03
    8 -2.0612413489651919e-02 -3.7877790722024657e-02 -8.5691734712158591e-03
    9  1.2263382774671270e-03 -5.9895799055484623e-02  4.0588659240649401e-03
   10 -3.7440753216426176e-02 -4.6456691559416383e-02 -1.0636399332268090e-01
   11 -3.2661856092849051e-02 -7.5500387920977463e-02  1.1885632033435473e-02
   12 -2.3166162640220526e-02 -6.6740696046220585e-02 -9.2808128163209339e-03
   13  1.7535325333773860e-03 -1.4604621599631754e-02 -2.7610891988407594e-02
   14  2.8149735580433134e-02 -6.3563214206855748e-02  7.4492378499084966e-02
   15  2.4305838534998442e-03  7.1135700954773600e-03 -3.0207324091680986e-02
   16  1.1449426216077799e-01 -6.3461697505436884e-02  2.0756074304336219e-02
   17  1.1714556130218040e-02  1.0446430266193403e-01  3.6365861543390894e-02
   18 -9.2367659037495664e-02  3.6774544203677408e-02 -6.6049192627083544e-02
   19 -9.7706710589851697e-02 -2.9443191787610248e-02  4.2123682373641815e-02
   20  5.8042341223428712e-03 -1.2104389541143005e-03  1.4565283993158821e-02
   21  9.7577971934171351e-02  3.6678603760412057e-02 -2.4126944368435588e-02
   22  8.4457546203480730e-03 -5.9921078808321059e-02  2.0335050625926256e-02
   23  4.7688299465539027e-02  1.1877198168582574e-01 -3.2379193036300082e-02
   24  7.7970150423267132e-02  5.7667199610007810e-02  5.7146883072702444e-02
   25  7.0271860854181273e-02 -4.2706597092193072e-02 -3.4975460737548668e-02
   26 -1.5841314381102450e-02 -1.1690659586025803e-01  1.0077570722559201e-01
   27  1.5231359666175337e-02  2.9284322474196281e-02  1.0711563735310445e-02
   28  8.8436437677884325e-02  3.5038915629166797e-03  4.1361615934702271e-02
   29 -1.6414684901000294e-02  4.4551861225322273e-02 -4.6093104191993100e-03
   30 -5.5028163808135369e-02 -1.3942838232525647e-03 -7.8635287340677290e-02
   31 -1.7126389022898446e-02 -1.0598042766439184e-01  5.0743125098716896e-02
   32 -1.2468377030293323e-01 -7.2760485586144660e-02 -4.2310147156906106e-02
...
+164 −0
Original line number Diff line number Diff line
LAMMPS data file via write_data, version 5 May 2020, timestep = 0

64 atoms
8 atom types

0.0000000000000000e+00 1.0862000000000000e+01 xlo xhi
0.0000000000000000e+00 1.0862000000000000e+01 ylo yhi
0.0000000000000000e+00 1.0862000000000000e+01 zlo zhi

Masses

1 28.06
2 28.06
3 28.06
4 28.06
5 28.06
6 28.06
7 28.06
8 28.06

Pair Coeffs # zero

1
2
3
4
5
6
7
8

Atoms # atomic

1 1 1.0821582679234250e+01 1.0768089890052606e+01 5.2782114154092112e-02 -1 -1 0
2 2 1.2644623589070805e-01 2.6973866151300663e+00 2.6838404910230733e+00 0 0 0
3 3 2.6886015615971299e+00 1.0779945762964871e+01 2.8299381505970089e+00 0 -1 0
4 4 2.8329007005604918e+00 2.6690743201866627e+00 1.2359937723893642e-01 0 0 0
5 5 1.5213921972716424e+00 1.2921595444932625e+00 1.3789642982618950e+00 0 0 0
6 6 1.4860425041058531e+00 3.8853665070739183e+00 3.9153843913498028e+00 0 0 0
7 7 4.1419871594220101e+00 1.4231884057342254e+00 3.8965351751257127e+00 0 0 0
8 8 4.0916002382684269e+00 4.0857045774480580e+00 1.4818331695143521e+00 0 0 0
9 1 5.4332483929070872e+00 1.8873958941024710e-01 1.4627921802284161e-01 0 0 0
10 2 5.4368414340977749e+00 2.8924828813043342e+00 2.8667860819470539e+00 0 0 0
11 3 8.1119493800203539e+00 1.0773000209952240e-01 2.5336452866728161e+00 0 0 0
12 4 8.2955426243976884e+00 2.8748882519562673e+00 3.8350628986186623e-02 0 0 0
13 5 6.7320798601505025e+00 1.3027095494870840e+00 1.4928982294197886e+00 0 0 0
14 6 6.8742317689794499e+00 3.9653412376102484e+00 4.0506805154464347e+00 0 0 0
15 7 9.6779045786138891e+00 1.1702527636124300e+00 4.0071980341104547e+00 0 0 0
16 8 9.4540589455765716e+00 4.1121983054349887e+00 1.1619194458593471e+00 0 0 0
17 1 1.0803705461284940e+01 5.2746878159845654e+00 6.1123252595366578e-02 -1 0 0
18 2 1.4726683047938480e-01 8.0601198670201093e+00 2.5246050069821555e+00 0 0 0
19 3 2.7558004708887545e+00 5.5610142272980951e+00 2.6646181990826121e+00 0 0 0
20 4 2.9144739608014811e+00 8.3018591904953851e+00 1.0783914655958263e+01 0 0 -1
21 5 1.2910071356246513e+00 6.6414284435159896e+00 1.3243501732305625e+00 0 0 0
22 6 1.4393274075135483e+00 9.3757380802070216e+00 4.1734140393865129e+00 0 0 0
23 7 3.8748234996653967e+00 6.6345588763271506e+00 4.1830344304096814e+00 0 0 0
24 8 4.0077815606028455e+00 9.5761890520229667e+00 1.2373973499758391e+00 0 0 0
25 1 5.3669071758277278e+00 5.4229041366278681e+00 1.0794824304575485e+01 0 0 -1
26 2 5.4196958007648099e+00 8.1568234541650497e+00 2.6217941520038499e+00 0 0 0
27 3 8.1026284023132771e+00 5.2810576792517949e+00 2.6349151849110681e+00 0 0 0
28 4 8.1262346520143254e+00 7.9467964047716446e+00 1.0843674997034331e+01 0 0 -1
29 5 6.9361807905637809e+00 6.6580470054546828e+00 1.4325206768451122e+00 0 0 0
30 6 6.9233840741657815e+00 9.4991345042823276e+00 4.0971134730800349e+00 0 0 0
31 7 9.6892812976096909e+00 6.6097689260640271e+00 3.9383403581013390e+00 0 0 0
32 8 9.6562735184356683e+00 9.3635243482716728e+00 1.3817214020043478e+00 0 0 0
33 1 1.0700092384318864e+01 1.8703247149802406e-02 5.3764748467288328e+00 -1 0 0
34 2 1.0698092821152924e+01 2.7275451171938538e+00 8.1887846771042252e+00 -1 0 0
35 3 2.5595904516932046e+00 2.8221607687054950e-02 8.0670603963325540e+00 0 0 0
36 4 2.8214419517898661e+00 2.8818837322808726e+00 5.4423884446264195e+00 0 0 0
37 5 1.3722461913183779e+00 1.3952374879780634e+00 6.8409604473096373e+00 0 0 0
38 6 1.4876249878676027e+00 4.0821710907970186e+00 9.4410230254944292e+00 0 0 0
39 7 3.9110806914297074e+00 1.3781808590946862e+00 9.6856988043922243e+00 0 0 0
40 8 3.9440249581294013e+00 4.1879712808554626e+00 6.9093173377591039e+00 0 0 0
41 1 5.5141663269005559e+00 1.7645621764308600e-01 5.5306499273458725e+00 0 0 0
42 2 5.5985780491752450e+00 2.7997724883389998e+00 8.1142115135675805e+00 0 0 0
43 3 8.0688992871690530e+00 1.6481945028752995e-01 8.2670009825157464e+00 0 0 0
44 4 8.0871061461850093e+00 2.8829989314598494e+00 5.3855410456855504e+00 0 0 0
45 5 6.9864811057959368e+00 1.4244451123004291e+00 6.9335024333115447e+00 0 0 0
46 6 6.7189272164787059e+00 4.1617273576112819e+00 9.3431993728237934e+00 0 0 0
47 7 9.3396936544866520e+00 1.2592509571339474e+00 9.6308365502537168e+00 0 0 0
48 8 9.3844506274835222e+00 4.2051961155365900e+00 6.8071138234708295e+00 0 0 0
49 1 1.7248042280435583e-01 5.5094660728082365e+00 5.4102856880367201e+00 0 0 0
50 2 3.7450733705167986e-02 7.9809813827585803e+00 8.2751000234673722e+00 0 0 0
51 3 2.7655331604154934e+00 5.5383271031991237e+00 7.9931234676757006e+00 0 0 0
52 4 2.5155467702746610e+00 8.3325680062258929e+00 5.4759806385883039e+00 0 0 0
53 5 1.1807952451962258e+00 6.7101860129653650e+00 6.7638199088792641e+00 0 0 0
54 6 1.1959471910773762e+00 9.6844404374641329e+00 9.5649324596695067e+00 0 0 0
55 7 4.1090326500366361e+00 6.9877491657431232e+00 9.6832286446741698e+00 0 0 0
56 8 4.0458419253065214e+00 9.6567386267038486e+00 6.8650990115647899e+00 0 0 0
57 1 5.4797685959081948e+00 5.4847914290343374e+00 5.5035477801042365e+00 0 0 0
58 2 5.2795203845652381e+00 8.2286033879565554e+00 8.0581413858307709e+00 0 0 0
59 3 8.0498475764577027e+00 5.3937175246191762e+00 8.3399362744881937e+00 0 0 0
60 4 8.3304289868175641e+00 8.2409814428195727e+00 5.3806094685744537e+00 0 0 0
61 5 6.9330690971130133e+00 6.7598151784069209e+00 6.8812034851184363e+00 0 0 0
62 6 6.9458643451878403e+00 9.3250495720304549e+00 9.6826571158517201e+00 0 0 0
63 7 9.3283809458502258e+00 6.9575569047261068e+00 9.4418977316662893e+00 0 0 0
64 8 9.4282304328065276e+00 9.4433841793067455e+00 6.6169016084578596e+00 0 0 0

Velocities

1 -7.6695811444905315e-01 8.8776500375415912e-01 -4.6748679865524317e-01
2 -4.2174334498042004e-01 2.6596349461961127e-01 -1.1334804338647457e+00
3 3.1092663150899669e+00 -3.2607896569135373e+00 -4.5472992935642453e-01
4 -1.0033967676892164e+00 -4.0701495139485546e+00 3.0519108521711837e+00
5 2.1876978647560312e+00 -1.8528542484907762e+00 5.5868611584263783e-01
6 -5.8915345282488856e+00 -1.2670766284310366e+00 -1.4548236578657073e-01
7 -7.4671607451840827e-01 -2.3224748454458921e+00 2.9040191974877243e+00
8 8.8344717384787486e-01 2.1131388234004187e+00 -2.6319923612777498e+00
9 -1.4945940737308610e+00 2.4036759792415352e+00 2.9873898113274451e+00
10 -2.3062527275180000e-02 6.3069649849804210e-01 -4.6199114681815372e+00
11 3.8719801571165269e-01 -2.6757201256087666e+00 -2.8351493398548979e+00
12 3.1622414879535530e+00 1.1788951785955282e-01 -1.6811026088924106e+00
13 -4.9777200700829107e+00 1.0067220620999075e-01 -1.1749631996478570e-01
14 1.6098573779552736e+00 -1.4257777445753939e+00 9.3729752744584949e-01
15 -1.9671428383911080e-01 -1.1467725283686230e+00 -7.1090487650568090e-01
16 2.4293095169865944e+00 -2.2853507053089284e+00 3.6552591604907518e+00
17 2.1486682069514684e-01 6.5398679889262946e-03 -7.8674906209013318e-01
18 -5.9695750825985816e-01 -3.8903164843963536e+00 7.0106707544958913e-01
19 1.8513305622305032e+00 2.7457421924307135e+00 -2.6843196517815027e-01
20 4.6472920038025278e-02 3.3363247063995392e+00 -7.5654131995610463e-01
21 2.0461345318527768e+00 6.5187960424485167e+00 2.2781592760522332e-01
22 -3.2896669679401891e-01 -4.6935568644796639e+00 2.6343294291762615e-01
23 -2.0431037382403300e-01 -1.1908279321425959e+00 -2.1024589473753172e+00
24 -6.1675703823018013e+00 3.7268908602022122e+00 2.2946207883205223e+00
25 9.8131185739798532e-01 1.0773612880108889e-01 1.7659001559413789e+00
26 2.5123700267960087e+00 -9.7029098941340775e-01 -3.7611190518657027e+00
27 -2.8065233782242118e+00 2.7735023884863090e+00 -5.7440441416815013e-01
28 -2.8351435666922815e+00 -2.4736491871242201e+00 -2.7770228999188280e+00
29 -6.1233333948487512e-01 -1.4612515482031314e+00 -2.1246997373192005e+00
30 -1.6587500360685015e+00 1.2439126820981170e+00 4.6333319512528819e+00
31 -1.6739126871847136e+00 -4.0135139175283019e+00 2.4388454178990426e+00
32 -1.1634332347436640e+00 -7.7629078403429219e-01 1.2067789175483656e+00
33 2.8857524470408986e+00 -1.7030276362003458e+00 -2.0845880086526334e+00
34 3.6831626165197040e+00 -3.5993774010234549e-02 -8.0961124509532045e-01
35 -2.8770388338755111e+00 3.9112196797609061e-01 -2.6842134469568530e+00
36 2.3476192919341012e+00 -1.4869539504293825e+00 2.6805229608818411e+00
37 -1.9857985903088504e+00 3.6532965667626152e+00 7.6783019003634334e-01
38 -8.6498749460025504e-05 -1.2786473611543103e+00 -2.5574004902042100e+00
39 3.2183147762059252e+00 2.1412145724457892e+00 -1.3379757716793121e+00
40 -3.3194222393529000e+00 8.6217442393646981e-01 -9.7775722554209368e-02
41 -2.4363036081885721e+00 -2.5050089095178842e+00 -1.7152684549177144e+00
42 -1.8123025300125442e+00 4.1040607170758863e+00 1.8113434768789887e+00
43 8.2116299357978972e-01 -1.4091949665194181e+00 1.5546533259848685e+00
44 -1.5106466229056412e+00 -3.7176405569288479e-01 2.9687407194461857e+00
45 2.0036640890479163e+00 3.4558719013661352e+00 2.4761488653104236e+00
46 1.1557532358053453e-05 6.8233360706012713e-02 -8.1988351060085085e-01
47 2.0610372874209806e+00 2.9250619947397714e+00 -4.6246198532284426e+00
48 3.7769045376898491e+00 -6.2124369701718694e+00 6.5274567582735055e-01
49 4.6074991208714851e+00 8.2503257645594730e-01 8.5565348020904775e-01
50 8.5045797019446467e-01 1.5642419476572114e+00 3.4414259937041352e+00
51 3.0951672150001852e+00 6.4364948036249203e-01 -2.5200572359688507e+00
52 -3.4329134343428513e-01 -3.5864072102511093e+00 -1.3092330149470974e+00
53 -4.3836593017980983e+00 -3.3032188251492345e-01 -4.2201800726103427e+00
54 1.0067907201962536e+00 3.3833856103070516e+00 -4.2244492140600592e-01
55 1.3872579123070348e+00 8.7826766277411539e-01 -9.4887528280134281e-01
56 6.9357081915378493e-01 3.8110270186753179e+00 1.4629354931293179e-01
57 6.6962746178223931e-01 6.6943282268523383e+00 9.9362589535207779e-01
58 -1.7296381154890770e+00 -5.5052794989092768e-01 2.7151993562471821e+00
59 1.1683811118902456e+00 -5.6097747254105945e+00 -1.3465121907588353e+00
60 4.2289642990542493e+00 -5.3831728480380980e-01 3.0410178504652357e+00
61 8.1393552020156468e-01 -8.8749030091659420e-01 2.4504472860529236e+00
62 -2.4947166250287984e+00 2.8424666276480779e+00 1.1665977930274425e+00
63 -8.7979164195267434e-01 2.3389132899677176e+00 3.8359678050967816e-01
64 -3.3977492794459896e+00 -1.2790636562498856e+00 -2.8439591835333616e-01
+16 −0
Original line number Diff line number Diff line
variable  newton_pair     index  on
variable  newton_bond     index  on
variable  units           index  metal
variable  input_dir       index  .
variable  data_file       index ${input_dir}/data.manybody
variable  pair_style      index 'zero 8.0'

atom_style       atomic
atom_modify      map array
neigh_modify     delay 2 every 2 check no
timestep         0.0001
units            ${units}
newton           ${newton_pair} ${newton_bond}

pair_style       ${pair_style}
read_data        ${data_file}
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