Convert British spelling to American (ca1e1e2d) · Commits · 郑智淋 / lammps

doc/src/Build_development.rst

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		@@ -44,7 +44,7 @@ usually faster than using tools like Valgrind.
		.. code-block:: bash

		-D ENABLE_SANITIZE_ADDRESS=value # enable Address Sanitizer, value = no (default) or yes
		-D ENABLE_SANITIZE_UNDEFINED=value # enable Undefined Behaviour Sanitizer, value = no (default) or yes
		-D ENABLE_SANITIZE_UNDEFINED=value # enable Undefined Behavior Sanitizer, value = no (default) or yes
		-D ENABLE_SANITIZE_THREAD=value # enable Thread Sanitizer, value = no (default) or yes

		----------

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		@@ -373,7 +373,7 @@ def generate_strand(bp, sequence=None, start_pos=np.array([0, 0, 0]), \
		# if not provided switch off random orientation
		if perp is None or perp is False:
		v1 = np.random.random_sample(3)
		# comment in to suppress randomised base vector
		# comment in to suppress randomized base vector
		v1 = [1,0,0]
		v1 -= dir * (np.dot(dir, v1))
		v1 /= np.sqrt(sum(v1*v1))
		@@ -644,12 +644,12 @@ def read_strands(filename):

		# generate random position of the first nucleotide
		com = box_offset + np.random.random_sample(3) * box
		# comment out to randomise
		# comment out to randomize
		com = [0,0,0]

		# generate the random direction of the helix
		axis = np.random.random_sample(3)
		# comment out to randomise
		# comment out to randomize
		axis = [0,0,1]
		axis /= np.sqrt(np.dot(axis, axis))

		@@ -702,12 +702,12 @@ def read_strands(filename):

		# generate random position of the first nucleotide
		com = box_offset + np.random.random_sample(3) * box
		# comment out to randomise
		# comment out to randomize
		com = [-30,0,0]

		# generate the random direction of the helix
		axis = np.random.random_sample(3)
		# comment out to randomise
		# comment out to randomize
		axis = [0,0,1]
		axis /= np.sqrt(np.dot(axis, axis))

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		@@ -47,7 +47,7 @@ set object 1 rectangle from graph 0,0 to graph 1,1 fillcolor rgb "white" behind
		unset key
		set grid front

		set title 'Short time behaviour' offset 0,-0.8
		set title 'Short time behavior' offset 0,-0.8
		set ylabel ''
		set xrange[0:10]
		set yrange[0:40]

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		@@ -822,7 +822,7 @@
		"}\n",
		"\n",
		"mpl.figure.prototype._key_event_extra = function(event, name) {\n",
		" // Handle any extra behaviour associated with a key event\n",
		" // Handle any extra behavior associated with a key event\n",
		"}\n",
		"\n",
		"mpl.figure.prototype.key_event = function(event, name) {\n",
		@@ -1053,7 +1053,7 @@
		"mpl.find_output_cell = function(html_output) {\n",
		" // Return the cell and output element which can be found uniquely in the notebook.\n",
		" // Note - this is a bit hacky, but it is done because the \"notebook_saving.Notebook\"\n",
		" // IPython event is triggered only after the cells have been serialised, which for\n",
		" // IPython event is triggered only after the cells have been serialized, which for\n",
		" // our purposes (turning an active figure into a static one), is too late.\n",
		" var cells = IPython.notebook.get_cells();\n",
		" var ncells = cells.length;\n",

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